Detailed information of scaffold102.g35.t1 in Morbakka virulenta

Genomic Location: scaffold102:1785094...1858060
NR annotation: KAG1696947.1, Transposable element Tcb2 transposase [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4A3R3Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Sus scrofa OX=9823 GN=DMBT1 PE=2 SV=1
Q9UGM3Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Homo sapiens OX=9606 GN=DMBT1 PE=1 SV=2
Q60997Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Mus musculus OX=10090 GN=Dmbt1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF13384HTH_23Homeodomain-like domainDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001190DomainSRCR domainInterproscan
IPR006212RepeatFurin-like repeatInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR047655FamilyTransposase IS630-likeInterproscan
IPR001368DomainTNFR/NGFR cysteine-rich regionInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15332UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19020STAB1; stabilin-1-Glycosaminoglycan binding proteinsko00536deepkoala

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