Detailed information of scaffold102.g6.t1 in Morbakka virulenta

Genomic Location: scaffold102:554591...599620
NR annotation: EDO34316.1, predicted protein, partial [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y3Q4Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 OS=Homo sapiens OX=9606 GN=HCN4 PE=1 SV=1
Q9JKA7Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 OS=Rattus norvegicus OX=10116 GN=Hcn4 PE=1 SV=1
O70507Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 OS=Mus musculus OX=10090 GN=Hcn4 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00520Ion_transIon transport proteinFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00027cNMP_bindingCyclic nucleotide-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005821DomainIon transport domainInterproscan
IPR000595DomainCyclic nucleotide-binding domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR018488Conserved_siteCyclic nucleotide-binding, conserved siteInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR051413FamilyPotassium/sodium hyperpolarization-activated cyclic nucleotide-gated channelInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR018490Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45689I[[H]] CHANNEL, ISOFORM EInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003254Biological Processregulation of membrane depolarizationInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0098855Cellular ComponentHCN channel complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04955HCN2; hyperpolarization activated cyclic nucleotide-gated potassium channel 2-Ion channelsko04040deepkoala

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