Detailed information of scaffold111.g12.t1 in Morbakka virulenta

Genomic Location: scaffold111:231156...350517
NR annotation: XP_033631739.1, uncharacterized protein K02A2.6-like [Asterias rubens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8TDG4Helicase POLQ-like OS=Homo sapiens OX=9606 GN=HELQ PE=1 SV=2
Q2VPA6Helicase POLQ-like OS=Mus musculus OX=10090 GN=Helq PE=1 SV=2
Q9VSE2Helicase POLQ-like OS=Drosophila melanogaster OX=7227 GN=mus301 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF21099POLQ_helicalDNA_pol_Q helicase like region helical domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF20470HTH_61Helix-turn-helix domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR048960DomainPOLQ-like, helical domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR046931DomainDNA polymerase theta-like, helix-turn-helix domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR013099DomainPotassium channel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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