Gene detail

Detailed information of scaffold113.g59.t2 in Aurelia aurita

Genomic Location: scaffold113:666491...674949
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI1 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold113.g59.t2

gaaaacatttcattttcgaaatttctctcttggtgttatttggaaatggagatctaaaacatggtaaaaattgatttcaaaatggtagggaataagcattattgtttctaggtttgcatgtcaacaacttgacaatgctcttgcttgaaatggtaaagacaacatggcattttgcacattcagtttgtgtgtgtttcaaatatctttccatatatgcagaaatcagagaattgttcttgtgttgccgtaaaagctctctttagccccctctctattaaactccctctctaataagcccctcccttccaagcttagatttttaaaatttcaattttcatatggtttcgattaaaactgcgtttgactctcaaaattgattccgaaaatatgaggtaaaagctcaaaaagctatcatttatagccttgtcatttgactttatgaataagccctccctctctttaagccaccctctggagtttctgagattaaagttgccccttgggggcttaatagagctatgtagattagtgtagaagagttttagtattgatctagtatatatgtaaaccatttaaatgagttggaaatttgaaaatcttagcacccagaatgtgaatacagtcaaccttggataagtcagtctcatacttatgcatattttataagtcagataaacgcttgagagttcaacttgcagtcatccttcaacatcccttcaaagtttgacttaaaatatatcagagaaactttttttgtatgaatcaatgaacaagcagttaagagtgatgcttttgcaaagaatgttatttcttaaagggttatttgatagatgttacttctgtacgaaagtctccctaggggttcttgtatatttctggtaaaaggatcttcagattttcattgaaaccctgcaatgattgtttgttttcaagagatctcgtctgctgtatgaggtgatgatgtgccccttagaactccatcccttagaactccttcgccgatgatacacttttcacatgctttgctaaatatcctaacatagatagaaactgcaaattttggctaaatggaagacgctggctaaatggcacatgcaagactctaagaactttactggagacaaacaaccccaatattcttgttgtacataagattaactccccaagcaaatatggcacaagaagtatatctgaacaataatggctttaatggtacatcattatgcattccatattcaagtattcaagtaaactctgcttattagagctaaatctgtcaaataccgattgcgccaaaaaaatgctcaggcgtttgaaaagttgtcgttcccagggtactagattgatgttaatgactcgatttccgtttgatagcagaaggactatagtattttcttgcattttatgagcaaggctagcttgggctaaatctttactgtttaatgcttgaaggagataaagtgtactttagtattcttctgtgtacagagattcttagatttgataaaatgttttggccctttttcaggcattttgcaactaaggcttttttgtaaagttgaatttacctacattttcagtggtgatcaaacacgagaaacatcacaaaatgctttgttctttcggctatcaagtagaatttgattgattcaaatccatccaatactctaggtcctgagaattttcaaatgtctgaatttttttgatgaacctgctatttgctgctattctctgaaaaatcataacatgccacaaagtggaccaaaagcacctgaacaaatttggaatcctactttggtttgcaacctcttgaaatatggaatgcatgtgatatagaatttttaatacttaacattttttgctctttttttatcccttccaccaggtttggtaagtaaatcattaattttcttcttgatgaaaattcaatggtagcttatcattagttagtcagagtagcaagttagacactgaagcaattctctgattctgcaaattggtgttatactgtatgttacttgtaaaaaaagaattaaaaactgggcatgcagtttctgccaagttgtctttgccatgaacttgtaagagcttgttgtaagttgtaaatacacatgaataatgtctctctttaatgactttaaactcatgagttttgccttggttttgttatatacctgtatgtccttcgctgcttcaaaaatgaaatgctgctgtaaaaatgaaatgaaatgtggttgcatcacgctgttactcaaaatgaaaaatgaatttgattgaatttggggatgaatgaattgattgatcaatgaaaacagagaaaagaggagcacaggaacggacatgaggaacgggacgagccacatagtcatcgcaatagccgctactcaagcaggcactcaagcgtaagagacgatgaggatggccatcttatctatcagcatggagactggctccaaaatagatatgagatccaaggtactctaggtgaaggaacttttgggaagtgtctcaagtgctatgataggagaaaagaaaaaattgttgcattgaaaataataaaaaatgttgacaaatatagggaagctgccaaactagaaataaaagtactggataaaatagctcagaaagatcctaatggtgaaagcctttgtatcaagttgcaaagttggtttgaatatcatgggcatatatgtttggcatttgaaagacttggcaaaagtgtcttcgacttcatgaaagagaataattatcagaaatacccaatgcaccaagtgatgcatattgcacatcaactaattgcttctgtaaaatttttacacagtattagactgacacacactgatttgaaacctgaaaacatgctgtttgtcaactcagactatgatgtctactggaatgaaaatctgcgtcaagacttgagaatccttgcaagcagtgaaatgaaactaattgattttggttcagccacatttgattgggagcatcacagcacgatagtttcaacaaggcattatcgtgcaccagaagtcgttctagaattaggctggtcacatccatgtgatatatggagtattggatgtatcatgttcgaactgtacactggaaacacgctttttcagacacatgataacagggaacatcttgcgatgatggaagctactttcggaccaattccttcagccatggtcagcaaaacaaaaaaaacgaaatacttcagaaaaggtcgattggattgggatgaaacaagtcctgatggtatttacgtgagagacaactgcagaagtcttaaggcacatacagcatcaaaaaacgacacggataaaaaattcatcgaccttttggagaagttacttcgatataacccagatgaacgtcttacggccagggaagctttgaaacatcctttctttgatgatttgagaagaagatcgaacggtgattcagattatgtttcatgttctagagggtctaattcacatgatcgataaattggttaattgataactgtcggagattctacatcgtggaatgaagccatggctagtcagccgtgcaagattccgtgcgaatttcagattcgaacaagactagccagccacttcgatttgaactcaaggatggagcaacttctgaagaagacgagcgaccagtttgtgatgcgaaaaaaggaaaatgactaatgtttctgaaacaagggtggatgtttttgcctcaattaagagagggaagaaaaacgataggagcaagctgcacgaccccctgggaaatacaacctttcttgtctgataaggttatcgtgcctaaatgcatttaattgcttgaaatgttgagtatgaaattacgttttgatgtagggagtaaattggatgggagtttgtgcaagaatatccactttccctttttcagaaatttgttgaaattaataataattacatatatatacagtatatgttgtattatgtcctttttaaggtaacctaattatgaaacttgtc

Transcript

scaffold113.g59.t2

GAAAACATTTCATTTTCGAAATTTCTCTCTTGGTGTTATTTGGAAATGGAGATCTAAAACATGGTAAAAATTGATTTCAAAATGGTAGGGAATAAGCATTATTGTTTCTAGGTTTGCATGTCAACAACTTGACAATGCTCTTGCTTGAAATGGTAAAGACAACATGGCATTTTGCACATTCAGTTTGTGTGTGTTTCAAATATCTTTCCATATATGCAGAAATCAGAGAATTGTTCTTGTGTTGCcgtaaaagctctctttagccccctctctattaaactccctctctaataagcccctcccttccaagcttagatttttaaaatttcaattttcatatggtttcgattaaaactgcgtttgactctcaaaattgattccgaaaatatgaggtaaaagctcaaaaagctatcatttatagccttgtcatttgactttatgaataagccctccctctctttaagccaccctctggagtttctgagattaaagttgccccttgggggcttaatagagctATGTAGATTAGTGTAGAAGAGTTTTAGTATTGATCTAGTATATATGTAAACCATTTAAATGAGTTGGAAATTTGAAAATCTTAGCACCCAGAATGTGAATACAGTCAACCTTGGATAAGTCAGTCTCATACTTATGCATATTTTATAAGTCAGATAAACGCTTGAGAGTTCAACTTGCAGTCATCCTTCAACATCCCTTCAAAGTTTGACTTAAAATATATCAGAGAAACTTTTTTTGTATGAATCAATGAACAAGCAGTTAAGAGTGATGCTTTTGCAAAGAATGTTATTTCTTAAAGGGTTATTTGATAGATGTTACTTCTGTACGAAAGTCTCCCTAGGGGTTCTTGTATATTTCTGGTAAAAGGATCTTCAGATTTTCATTGAAACCCTGCAATGATTGTTTGTTTTCAAGAGATCTCGTCTGCTGTATGAGGTGATGATGTGCCCCTTAGAACTCCATCCCTTAGAACTCCTTCGCCGATGATACACTTTTCACATGCTTTGCTAAATATCCTAACATAGATAGAAACTGCAAATTTTGGCTAAATGGAAGACGCTGGCTAAATGGCACATGCAAGACTCTAAGAACTTTACTGGAGACAAACAACCCCAATATTCTTGTTGTACATAAGATTAACTCCCCAAGCAAATATGGCACAAGAAGTATATCTGAACAATAATGGCTTTAATGGTACATCATTATGCATTCCATATTCAAGTATTCAAGTAAACTCTGCTTATTAGAGCTAAATCTGTCAAATAccgattgcgccaaaaaaatgctcaggcgtttgaaaagttgtcgttcccagggtactagattgatgttaatgactcgatttccgtttgatagcagaaggactatagtattttcttgcattttatgagcaaggctagcttgggctaaatctttactgtttaatgcttgaaggagataaagtgtactttagtattcttctgtgtacagagattcttagatttgataaaatgttttggccctttttcaggcattttgcaactaaggcttttttgtaaagttgaatttacctacattttcagtggtgatcaaacacgagaaacatcacaaaatgctttgttctttcggctatcaagtagaatttgattgattcaaatccatccaatactctaggtcctgagaattttcaaatgtctgaatttttttgatgaacctgctatTTGCTGCTATTCTCTGAAAAATCATAACATGCCACAAAGTGGACCAAAAGCACCTGAACAAATTTGGAATCCTACTTTGGTTTGCAACCTCTTGAAATATGGAATGCATGTGATATAGAATTTTTAATACTTAACATTTTTTGCTCTTTTTTTATCCCTTCCACCAGGTTTGGTAAGTAAATCATTAATTTTCTTCTTGATGAAAATTCAATGGTAGCTTATCATTAGTTAGTCAGAGTAGCAAGTTAGACACTGAAGCAATTCTCTGATTCTGCAAATTGGTGTTATACTGTATGTTACTTGTAAAAAAAGAATTAAAAACTGGGCATGCAGTTTCTGCCAAGTTGTCTTTGCCATGAACTTGTAAGAGCTTGTTGTAAGTTGTAAATACACATGAATAATGTCTCTCTTTAATGACTTTAAACTCATGAGTTTTGCCTTGGTTTTGTTATATACCTGTATGTCCTTCGCTGCTTCAAAAATGAAATGCTGCTGTAAAAATGAAATGAAATGTGGTTGCATCACGCTGTTACTCAAAATGAAAAATGAATTTGATTGAATTTGGGGATGAATGAATTGATTGATCAATGAAAACAGAGAAAAGAGGAGCACAGGAACGGACATGAGGAACGGGACGAGCCACATAGTCATCGCAATAGCCGCTACTCAAGCAGGCACTCAAGCGTAAGAGACGATGAGGATGGCCATCTTATCTATCAGCATGGAGACTGGCTCCAAAATAGATATGAGATCCAAGGTACTCTAGGTGAAGGAACTTTTGGGAAGTGTCTCAAGTGCTATGATAGGAGAAAAGAAAAAATTGTTGCATTGAAAATAATAAAAAATGTTGACAAATATAGGGAAGCTGCCAAACTAGAAATAAAAGTACTGGATAAAATAGCTCAGAAAGATCCTAATGGTGAAAGCCTTTGTATCAAGTTGCAAAGTTGGTTTGAATATCATGGGCATATATGTTTGGCATTTGAAAGACTTGGCAAAAGTGTCTTCGACTTCATGAAAGAGAATAATTATCAGAAATACCCAATGCACCAAGTGATGCATATTGCACATCAACTAATTGCTTCTGTAAAATTTTTACACAGTATTAGACTGACACACACTGATTTGAAACCTGAAAACATGCTGTTTGTCAACTCAGACTATGATGTCTACTGGAATGAAAATCTGCGTCAAGACTTGAGAATCCTTGCAAGCAGTGAAATGAAACTAATTGATTTTGGTTCAGCCACATTTGATTGGGAGCATCACAGCACGATAGTTTCAACAAGGCATTATCGTGCACCAGAAGTCGTTCTAGAATTAGGCTGGTCACATCCATGTGATATATGGAGTATTGGATGTATCATGTTCGAACTGTACACTGGAAACACGCTTTTTCAGACACATGATAACAGGGAACATCTTGCGATGATGGAAGCTACTTTCGGACCAATTCCTTCAGCCATGGTCAGCAAAACAAAAAAAACGAAATACTTCAGAAAAGGTCGATTGGATTGGGATGAAACAAGTCCTGATGGTATTTACGTGAGAGACAACTGCAGAAGTCTTAAGGCACATACAGCATCAAAAAACGACACGGATAAAAAATTCATCGACCTTTTGGAGAAGTTACTTCGATATAACCCAGATGAACGTCTTACGGCCAGGGAAGCTTTGAAACATCCTTTCTTTGATGATTTGAGAAGAAGATCGAACGGTGATTCAGATTATGTTTCATGTTCTAGAGGGTCTAATTCACATGATCGATAAATTGGTTAATTGATAACTGTCGGAGATTCTACATCGTGGAATGAAGCCATGGCTAGTCAGCCGTGCAAGATTCCGTGCGAATTTCAGATTCGAACAAGACTAGCCAGCCACTTCGATTTGAACTCAAGGATGGAGCAACTTCTGAAGAAGACGAGCGACCAGTTTGTGATGCGAAAAAAGGAAAATGACTAATGTTTCTGAAACAAGGGTGGATGTTTTTGCCTCAATTAAGAGAGGGAAGAAAAACGATAGGAGCAAGCTGCACGACCCCCTGGGAAATACAACCTTTCTTGTCTGATAAGGTTATCGTGCCTAAATGCATTTAATTGCTTGAAATGTTGAGTATGAAATTACGTTTTGATGTAGGGAGTAAATTGGATGGGAGTTTGTGCAAGAATATCCACTTTCCCTTTTTCAGAAATTTGTTGAAATTAATAATAATTACATATATATACAGTATATGTTGTATTATGTCCTTTTTAAGGTAACCTAATTATGAAACTTGTC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR051175 all species →	Family	Dual specificity CLK kinases	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45646 all species →	SERINE/THREONINE-PROTEIN KINASE DOA-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0043484 all species →	Biological Process	regulation of RNA splicing	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08823	CLK2_3; dual specificity protein kinase CLK2/3	EC:2.7.12.1	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.