Detailed information of scaffold1151.g2.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold1151:8601...40254
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 adaptor Cullin RING|DDB1 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03178
all species →		CPSF_ACPSF A subunit regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050358
all species →		FamilyRSE1/DDB1/CFT1/CPSF1Interproscan
IPR004871
all species →		DomainCleavage/polyadenylation specificity factor, A subunit, C-terminalInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10644
all species →		DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0035861
all species →		Cellular Componentsite of double-strand breakInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold1151.g2.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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