Gene detail

Detailed information of scaffold117.g43.t1 in Morbakka virulenta

Genomic Location: scaffold117:2116415...2175788
NR annotation: XP_028517055.1, ATP-binding cassette sub-family G member 2 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold117.g43.t1

GTCATAAAAATAACTTACTTTTCTATTGTCTCTTTTAATACTGTAATATTGCGAACCGAAAACATCCTGATGGTGGAGAACTTGTTGGAGAATCCTAGGAAGTGAGCAATCAAAGCAGGTGGTTCATAGAACCATTAATCAGTATGGAAGCTGAAAAAAGGTCAGTACGAAGCAGAGCAAATCAGAATTATGGATCTACAAGAGCATGTGAAGGGTCACGAAACCGATCCAGTGCTGAACAAGAAATTATCATTCACAATATTAAATATACAGTACCTGTTAAAAATAAAGGTAAAAAAACACAGAAAGAGATTTTGAAGAATGTGAGTGGATTTTTCAAGCCAGGACTAAATGCCATTCTTGGTCCAACAGGCAGTGGAAAAACAACGCTACTGGACGTGATTGCAGGGCGCAAAGAAAAAAAATATTTATCTGGAACTGTTTTAGTAAATGGTGAGGCCCAACCAAACAACTTCAAACTCATATCTGGTTATGTCGTTCAGGAGGACATTGTTTTGGGAACCTTAACAGTTCGAGAGAATCTTCTTTTCTCTGCTGCATTAAGACTTTCAAGCAAAATTACCAAAAAAGAAAGAGAGGTACGAGTACAAGCGATTATTGATGATCTTGGGCTAAATGCAGTTTCTGATAGCAAGATTGGAACAGAATTGATAAGAGGTGTTTCAGGAGGTGAGAAGAAACGAGCAAGTATTGGGATGGAACTGATAATATCGCCGGACATTCTCTTTCTTGATGAACCAACAACAGGGTTGGATGCTTCTACAGCATGTGATGTTATGGAGCTGCTCTTTAATCAAGCAAGAAAAGGAAGGACTATAATTCTTTCGATTCATCAACCAAGATATTCAATCTACAGATTATTCGATACTTTGACCATATTATCGGATGGAAAGCTCGTTTATCACGGGATCAGTAAGGAAGCACTTGATTATTTTGGCAACTTGGGCTTAGAATGTGAACGTCATAACAATCCACCAGATTTTTTCTTGGATATCATAAATAGAGAGAGAAAATCAAAGAAAATGGCAAAGGTGTTGCTTAACTATGATGTGATAGAGAACCACAAAAATGCACGTGCCGAAGCTATGGAGTCCTGGCATTCTTTGACAGATAGCTACGAAAACTCAAAACTAAGTCGTGATATTTTGAAATATGTTCATAACCAAGTAAAACAATTCGAAAAGAAAACAACAGTAGTGGCTAGTAAACAGATTTGTTACCCTACTTCATTCAGTAGACAGTTTGGTTTTATATTTTTGAGAGCAGCATTGAGTGCTTTAAGAAACCCGCAGACCTCAATATTTCAGATATTATTAAATGTGTTTATTGGATTAGTTGTTGGGGGCATTTATTATGATCTCGGATTGGGAAGATCAGGCTACCAGGACAGGGTTGGCGTTTTCTTCTTTTTGTGTATAAATGTGTACTTTGCCTGCATGAGTGCACTGCAAATTTTCATCAAAGAGAGAAAAATGTTCTTACACGAGGCTGGAAATGGATATTATCGTGTATCTTCCTATTTTCTTGCAAAGATTCTTGTAGACATCATATCGCTGCGATTTATTCCAATCCTCGTATTAGCATCTATCACATATTGGATGGTCGGATTACGAAGTGATTTTACGAAATATCTGATCTACACTGCTTGTCTTTGGATAGTAACATTATCAGGCTCTGGACTAGCTTTTTTCATTAGCGCATCCGTTAGTGTTTTTGCTGTTGCCAATTTGTTGATGGTATTCCCTGCTGTTATTATGTTTATATTTAGTGGCCTGCTGATTAATCTGAAAACACTTACCAAATATCTCCGATGGATAAAGTACTTTAGTGTAGTGAGATATGGTATAAACATACTAAGCATAAATGAACTGCACGGACTCACATTTGACTGTGGTTTGAAACCAAAAACAAATATTTCACTACCATGCCCAACTGGTGACGAACAGTTGAATGCACAGGGTATAGAGCTAAATGAAATTTGGCTGGACTTTATAGCGATTGGAAGCATAACGATTTTTTTGCTTATTTTGACCTATATCCAGTTAAGAAGAATGAAGAAGAGTACATGATCGTGCACAAAATGTTCACTATGGTTGGGTTTTTTATTTCTTTTTCAAAGTGTCGTGAATGGATAAATTAACTGGATCTTTAGTGGGGGTACACGAACTATAAACTAGTTTAACTTCT

Protein

Uniprot

Uniprot term	Description
Q9UNQ0	Broad substrate specificity ATP-binding cassette transporter ABCG2 OS=Homo sapiens OX=9606 GN=ABCG2 PE=1 SV=3
Q4GZT4	Broad substrate specificity ATP-binding cassette transporter ABCG2 OS=Bos taurus OX=9913 GN=ABCG2 PE=3 SV=2
Q5MB13	Broad substrate specificity ATP-binding cassette transporter ABCG2 OS=Macaca mulatta OX=9544 GN=ABCG2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01061	ABC2_membrane	ABC-2 type transporter	Family	Interproscan
PF00005	ABC_tran	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013525	Domain	ABC-2 type transporter, transmembrane domain	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR050352	Family	ATP-binding cassette subfamily G transporters	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48041	ABC TRANSPORTER G FAMILY MEMBER 28	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05681	ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2	-	CD molecules	ko04090	deepkoala