Detailed information of scaffold12.g89.t2 in Morbakka virulenta

Genomic Location: scaffold12:3030005...3105262
NR annotation: CAB4018711.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1W617Protein Shroom4 OS=Mus musculus OX=10090 GN=Shroom4 PE=1 SV=1
Q9ULL8Protein Shroom4 OS=Homo sapiens OX=9606 GN=SHROOM4 PE=1 SV=3
Q13796Protein Shroom2 OS=Homo sapiens OX=9606 GN=SHROOM2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF08687ASD2Apx/Shroom domain ASD2FamilyInterproscan
PF17820PDZ_6PDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001478DomainPDZ domainInterproscan
IPR014799DomainApx/Shrm Domain 2Interproscan
IPR041489DomainPDZ domain 6Interproscan
IPR027685FamilyShroom familyInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15012APICAL PROTEIN/SHROOM-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0007015Biological Processactin filament organizationInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0043296Cellular Componentapical junction complexInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

TOP