Detailed information of scaffold121.g108.t1 in Morbakka virulenta

Genomic Location: scaffold121:651303...654889
NR annotation: MCB1066700.1, signal recognition particle protein [Simkania sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6MDH3Peptide chain release factor 1 OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=prfA PE=3 SV=1
Q822M2Peptide chain release factor 1 OS=Chlamydia caviae (strain ATCC VR-813 / DSM 19441 / 03DC25 / GPIC) OX=227941 GN=prfA PE=3 SV=1
P37105Signal recognition particle protein OS=Bacillus subtilis (strain 168) OX=224308 GN=ffh PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00472RF-1RF-1 domainFamilyInterproscan
PF03462PCRFPCRF domainDomainInterproscan
PF00448SRP54SRP54-type protein, GTPase domainDomainInterproscan
PF02978SRP_SPBSignal peptide binding domainDomainInterproscan
PF05175MTSMethyltransferase small domainDomainInterproscan
PF02881SRP54_NSRP54-type protein, helical bundle domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000352DomainPeptide chain release factor class IInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036225Homologous_superfamilySRP/SRP receptor, N-terminalInterproscan
IPR000897DomainSignal recognition particle, SRP54 subunit, GTPase domainInterproscan
IPR005139DomainPeptide chain release factorInterproscan
IPR004125DomainSignal recognition particle, SRP54 subunit, M-domainInterproscan
IPR045853Homologous_superfamilyPeptide chain release factor class I superfamilyInterproscan
IPR036891Homologous_superfamilySignal recognition particle, SRP54 subunit, M-domain superfamilyInterproscan
IPR002052Conserved_siteDNA methylase, N-6 adenine-specific, conserved siteInterproscan
IPR004780FamilySignal recognition particle proteinInterproscan
IPR007848DomainMethyltransferase small domainInterproscan
IPR004373FamilyPeptide chain release factor 1Interproscan
IPR042101Homologous_superfamilySignal recognition particle SRP54, N-terminal domain superfamilyInterproscan
IPR022941FamilySignal recognition particle, SRP54 subunitInterproscan
IPR013822DomainSignal recognition particle SRP54, helical bundleInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003747Molecular Functiontranslation release factor activityInterproscan
GO:0006415Biological Processtranslational terminationInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0008312Molecular Function7S RNA bindingInterproscan
GO:0048500Cellular Componentsignal recognition particleInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0016149Molecular Functiontranslation release factor activity, codon specificInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

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