Detailed information of scaffold121.g124.t1 in Morbakka virulenta

Genomic Location: scaffold121:776650...780331
NR annotation: NGX50685.1, Translation initiation factor IF-2 [Chlamydiota bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6MD64Translation initiation factor IF-2 OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=infB PE=3 SV=1
Q9PKU0Translation initiation factor IF-2 OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=infB PE=3 SV=1
Q9Z8M1Translation initiation factor IF-2 OS=Chlamydia pneumoniae OX=83558 GN=infB PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF13184KH_5NusA-like KH domainDomainInterproscan
PF08529NusA_NNusA N-terminal domainDomainInterproscan
PF11987IF-2Translation-initiation factor 2DomainInterproscan
PF04760IF2_NTranslation initiation factor IF-2, N-terminal regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR015946Homologous_superfamilyK homology domain-like, alpha/betaInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR015760FamilyTranslation initiation factor IF- 2Interproscan
IPR003029DomainS1 domainInterproscan
IPR025249DomainKH domain, NusA-likeInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR044145DomainTranslation initiation factor IF-2, domain IIInterproscan
IPR036925Homologous_superfamilyTranslation initiation factor IF-2, domain 3 superfamilyInterproscan
IPR030842FamilyTranscription termination/antitermination protein NusA, bacterialInterproscan
IPR036555Homologous_superfamilyNusA, N-terminal domain superfamilyInterproscan
IPR000178FamilyTranslation initiation factor IF-2, bacterial-likeInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR009019Homologous_superfamilyK homology domain superfamily, prokaryotic typeInterproscan
IPR013735DomainTranscription factor NusA, N-terminalInterproscan
IPR023115DomainTranslation initiation factor IF- 2, domain 3Interproscan
IPR006847DomainTranslation initiation factor IF-2, N-terminalInterproscan
IPR010213DomainTranscription termination factor NusAInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43381TRANSLATION INITIATION FACTOR IF-2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0006353Biological ProcessDNA-templated transcription terminationInterproscan
GO:0031564Biological Processtranscription antiterminationInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0031554Biological Processregulation of termination of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02519infB, MTIF2; translation initiation factor IF-2-Mitochondrial biogenesisko03029deepkoala

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