Detailed information of scaffold121.g219.t1 in Morbakka virulenta

Genomic Location: scaffold121:1383855...1386388
NR annotation: HAZ15518.1, hypothetical protein [Parachlamydiales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O83349Serine hydroxymethyltransferase OS=Treponema pallidum (strain Nichols) OX=243276 GN=glyA PE=3 SV=1
A8M1D3Serine hydroxymethyltransferase OS=Salinispora arenicola (strain CNS-205) OX=391037 GN=glyA PE=3 SV=1
A0R2V7Serine hydroxymethyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=glyA PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00574CLP_proteaseClp proteaseDomainInterproscan
PF00464SHMTSerine hydroxymethyltransferaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023562FamilyClp protease proteolytic subunit /Translocation-enhancing protein TepAInterproscan
IPR001907FamilyATP-dependent Clp protease proteolytic subunitInterproscan
IPR019798Binding_siteSerine hydroxymethyltransferase, pyridoxal phosphate binding siteInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR033135Active_siteClpP, histidine active siteInterproscan
IPR049943FamilySerine hydroxymethyltransferase-likeInterproscan
IPR029045Homologous_superfamilyClpP/crotonase-like domain superfamilyInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR001085FamilySerine hydroxymethyltransferaseInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR039429DomainSerine hydroxymethyltransferase-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11680SERINE HYDROXYMETHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004176Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0004372Molecular Functionglycine hydroxymethyltransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006730Biological Processone-carbon metabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0019264Biological Processglycine biosynthetic process from serineInterproscan
GO:0046653Biological Processtetrahydrofolate metabolic processInterproscan
GO:0046655Biological Processfolic acid metabolic processInterproscan
GO:0050897Molecular Functioncobalt ion bindingInterproscan
GO:0070905Molecular Functionserine bindingInterproscan
GO:0035999Biological Processtetrahydrofolate interconversionInterproscan

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