Detailed information of scaffold121.g332.t1 in Morbakka virulenta

Genomic Location: scaffold121:2026597...2027927
NR annotation: MCB1080536.1, serine--tRNA ligase [Chlamydiia bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5L4Z0Serine--tRNA ligase OS=Chlamydia abortus (strain DSM 27085 / S26/3) OX=218497 GN=serS PE=3 SV=1
Q9Z736Serine--tRNA ligase OS=Chlamydia pneumoniae OX=83558 GN=serS PE=3 SV=1
Q255Z9Serine--tRNA ligase OS=Chlamydia felis (strain Fe/C-56) OX=264202 GN=serS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02403Seryl_tRNA_NSeryl-tRNA synthetase N-terminal domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042103Homologous_superfamilySerine-tRNA synthetase, type1, N-terminal domain superfamilyInterproscan
IPR015866DomainSerine-tRNA synthetase, type1, N-terminalInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan
IPR033729DomainSerine-tRNA ligase catalytic core domainInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR002317FamilySerine-tRNA ligase, type1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43697SERYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004828Molecular Functionserine-tRNA ligase activityInterproscan
GO:0006434Biological Processseryl-tRNA aminoacylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01875SARS, serS; seryl-tRNA synthetaseEC:6.1.1.11
Transfer RNA biogenesisko03016deepkoala

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