Detailed information of scaffold121.g42.t1 in Morbakka virulenta

Genomic Location: scaffold121:278606...286145
NR annotation: MCB1071888.1, VacB/RNase II family 3'-5' exoribonuclease [Chlamydiia bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Z848Ribonuclease R OS=Chlamydia pneumoniae OX=83558 GN=rnr PE=3 SV=1
Q9PK00Ribonuclease R OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=rnr PE=3 SV=1
O84402Ribonuclease R OS=Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx) OX=272561 GN=rnr PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00773RNBRNB domainDomainInterproscan
PF08206OB_RNBRibonuclease B OB domainDomainInterproscan
PF04367DUF502Protein of unknown function (DUF502)FamilyInterproscan
PF17876CSD2Cold shock domainDomainInterproscan
PF00459Inositol_PInositol monophosphatase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033942FamilyInositol monophosphataseInterproscan
IPR004476FamilyRibonuclease II/ribonuclease RInterproscan
IPR001900DomainRibonuclease II/RInterproscan
IPR003029DomainS1 domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR013223DomainRibonuclease B, N-terminal OB domainInterproscan
IPR022337FamilyInositol monophosphatase SuhB-likeInterproscan
IPR007462FamilyProtein CONTINUOUS VASCULAR RING 1-likeInterproscan
IPR000760FamilyInositol monophosphatase-likeInterproscan
IPR040476DomainRNase II/RNase R, cold shock domainInterproscan
IPR011129DomainCold shock domainInterproscan
IPR020550Conserved_siteInositol monophosphatase, conserved siteInterproscan
IPR020583Binding_siteInositol monophosphatase, metal-binding siteInterproscan
IPR011805FamilyRibonuclease RInterproscan
IPR050180FamilyRNR RibonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23355RIBONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008934Molecular Functioninositol monophosphate 1-phosphatase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0016070Biological ProcessRNA metabolic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0046854Biological Processphosphatidylinositol phosphate biosynthetic processInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

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