Detailed information of scaffold1237.g1.t5 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold1237:4829...36064
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018
all species →
SH3_1SH3 domainDomainInterproscan
PF14604
all species →
SH3_9Variant SH3 domainDomainInterproscan
PF03114
all species →
BARBAR domainDomainInterproscan
PF00621
all species →
RhoGEFRhoGEF domainDomainInterproscan
PF07653
all species →
SH3_2Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035899
all species →
Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR001452
all species →
DomainSH3 domainInterproscan
IPR004148
all species →
DomainBAR domainInterproscan
IPR000219
all species →
DomainDbl homology (DH) domainInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR051492
all species →
FamilyDynamin-binding and Rho GEFInterproscan
IPR001331
all species →
Conserved_siteGuanine-nucleotide dissociation stimulator, CDC24, conserved siteInterproscan
IPR027267
all species →
Homologous_superfamilyAH/BAR domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22834
all species →
NUCLEAR FUSION PROTEIN FUS2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0035556
all species →
Biological Processintracellular signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold1237.g1.t5.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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