Detailed information of scaffold1237.g1.t7 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold1237:4829...36064
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14604
all species →
SH3_9Variant SH3 domainDomainInterproscan
PF03114
all species →
BARBAR domainDomainInterproscan
PF00621
all species →
RhoGEFRhoGEF domainDomainInterproscan
PF00018
all species →
SH3_1SH3 domainDomainInterproscan
PF07653
all species →
SH3_2Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452
all species →
DomainSH3 domainInterproscan
IPR004148
all species →
DomainBAR domainInterproscan
IPR000219
all species →
DomainDbl homology (DH) domainInterproscan
IPR035899
all species →
Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR027267
all species →
Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR001331
all species →
Conserved_siteGuanine-nucleotide dissociation stimulator, CDC24, conserved siteInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR051492
all species →
FamilyDynamin-binding and Rho GEFInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22834
all species →
NUCLEAR FUSION PROTEIN FUS2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0035556
all species →
Biological Processintracellular signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20705DNMBP, ARHGEF36, TUBA; dynamin-binding protein-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP