Gene detail

Detailed information of scaffold126.g12.t4 in Aurelia aurita

Genomic Location: scaffold126:173530...206305
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI1 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold126.g12.t4

atatttattgggatttgtcaaacagccatattttatttttgtttacatggtattttaaaatgtgtttttagttactctgttttaatcttttcttcatagatgcacaaaagatcgtccccatcctgatggtaatcattaatgtgaccaatgtgaatttgcggatatttttcaactgcaaagataagctttctgaaatgcctctaaaaagccggcatgttcattaagatttagaaacctaccctgctttaatcgacctctctgttccnagcacaagattgggttttctctccccaaaagccaaactattagcggggtctagttaaactatacatcattcgatgcgtaagaatgtagggattctaaccatatcaaaataattggcaaagcttgtaaaaggatattttccaggcaactttattgcttaagagagtatacctcactcaaaagctattttgtacccttgcgtttaacataacaaaatctaacttctatcaacaggaagtgcagactctaagctaccaaagtgtgtctcagattctttaaagtcctccttcccttgataatacacgctgtcataaatttggaaataacttctctgccctcgtacagttgtatttggctataaaaggcggaccagaggacatgcgaaggttctgagacacactttgcttgcctgacgcctgctccggtagtgtgcaaaatgtggagccattcgattggttcctagggtacaaaatagctttttcgtacctgtacctagtggatttttaagtcctgaaaaaagggaattttactgatggcacttcgaaagtaaacaccaaggtcgcgtaagccacactgtaatccgggtcaagcaattaccgctttaaaagcaatcaatccatttaaacaaaggtatcgatacataaaatgtggtttcatgtttgttttgtagcacacgaccgacttaataggtcaaaaagctaggattataatttaaaccacacagaaaactttgcgtgagaagttgtagcatccttccttcgatcaagaattataatttttcaacatgtctgttacttccaaagatggtatctttgtgtttcttaaaagttgggtttctgagatttgaaaaaatccgaaaattggctttttcggcctacaaacgtttaccgtaaccttaatttaatgtcttttaggaagaacagtagactttgaaaatgtgaatattaagtgtagattatttaaaaagtgtctttcgaatcctagatttttgtgaatgccattgccaagaggcactatctggtgctcctccgcgtggtttacagtttactcttggaacaaaaagtaagccagaaatgttcgataccatcgtcatggcaaatctggggtacttccaactgaaagctttccctggatcattttcgctgaaactccgtgaagggaggtcctctgagatatacaaaattgacaggtnaggtttatcatcaagattgacatttaaaccaggaatatcagagagctgatcaaagagatcttgccgcatcgagtcaaactgggggcaatgcaggagaaagtgctcgttgtcttccttttcagtaccacaagcacaaaatggagggtacttccaactgaaagctttccctggatcattttcgctgaaactccgtgaagggaggtcctctgagatatacaaaattgacagagcacatttttaagtggcaaaaaatccgtcatcttaaaaaagtccaaaaatcactaaaatgggtactggaggagcaaattgggatgcacttgtaggaacctttagtcaaagcattgagggcagtgatgatcatgcagacgaaggccatgtcactgtcactgttgacagtcttgaaggaagctttctcaaggctaaggtttcacgtaatcctggtaaagatagcgaagatctattatcaggagatgataaatccaaaggaatctgggattcgattacaagttacgtgaacaaagatcacgaagacattggtaaaaatgggactgttcatatattttcagttgcgactggtcgtctttatgaaagattcctcagaatcatgatgttgacagttttaaagcacacgaaaaatcctgtcaagttctggtttttgaaaaattatctttcttctactttcatgagttttcttccatacatggctaaagagtacaactttgattatgctctggttcaatatcaatggccaagctggttacaccgacagacagacaagcaaagaatcatatggggtgcagaagagaaaaggatataaaatgtgaaaactgatactaagaaaaataaacaatgtaaaatattgaaaaacaagggagggtaatgccaaccccacccccccaaggcccacagcaaattgttactaatattattaaatcagcaaccatttcacttgtccacttgaatggcttcctttttctggaattttcttcacctctattcgcttttgccgtggtttgttttgattttgagcgcgaagatttgttgtccgccattgtcgattcggtgatggaaaactggtttggcgccaacttttttgcgcatgcgtatatccgtcatttccagcccacctgggtgagccagcccacctgatcgcgtttacatgatcaattctcatcccacctgacgtggatcccaccagcctttctcacggatctcaccaaggtgggctggcccaccaccctccatgtaaacgtaactgcagattaacaaaggactgtattgaat

Transcript

scaffold126.g12.t4

ATATTTATTGGGATTTGTCAAACAGCCATATTTTATTTTTGTTTACATGGTATTTTAAAATGTGTTTTTAGTTACTCTGTTTTAATCTTTTCTTCATAGATGCACAAAAGATCGTCCCCATCCTGATGGTAATCATTAATGTGACCAATGTGAATTTGCGGATATTTTTCAACTGCAAAGATAAGCTTTCTGAAATGCCTCTAAAAAGccggcatgttcattaagatttagaaacctaccctgctttaatcgacctctctgttccnagcacaagattgggttttctctccccaaaagccaaactattagcggggtctagttaaactatacatcattcgatgcgtaagaatgtagggattctaaccatatcaaaataattggcaaagcttgtaaaaggatattttccaggcaactttattgcttaagagagtatacctcactcaaaagctattttgtacccttgcgtttaacataacaaaatctaacttctatcaacaggaagtgcagactctaagctaccaaagtgtgtctcagattctttaaagtcctccttcccttgataatacacgctgtcataaatttggaaataacttctctgccctcgtacagttgtatttggctataaaaggcggaccagaggacatgcgaaggttctgagacacactttgcttgcctgacgcctgctccggtagtgtgcaaaatgtggagccattcgattggttcctagggtacaaaatagctttttcgtacctgtacctagtggatttttaagtcctgaaaaaagggaattttactgatggcacttcgaaagtaaacaccaaggtcgcgtaagccacactgtaatccgggtcaagcaattaccgctttaaaagcaatcaatccatttaaacaaaggtatcgatacataaaatgtggtttcatgtttgttttgtagcacacgaccgacttaataggtcaaaaagctaggattataatttaaaccacacagaaaactttgcgtgagaagttgtagcatccttccttcgatcaagaattataatttttcaacatgtctgttacttccaaagatggtatctttgtgtttcttaaaagttgggtttctgagatttgaaaaaatccgaaaattggctttttcggcctacaaacgtttaccgtaaccttaaTTTAATGTCTTTTAGGAAGAACAGTAGACTTTGAAAATGTGAATATTAAGTGTAGATTATTTAAAAAGTGTCTTTCGAATCCTAGATTTTTGTGAATGCCATTGCCAAGAGGCACTATCTGGTGCTCCTCCGCGTGGTTTACAGTTTACTCTTGGAACAAAAAGTAAGCCAGAAATGTTCGATACCATCGTCATGGCAAATCTGGGGTACTTCCAACTGAAAGCTTTCCCTGGATCATTTTCGCTGAAACTCCGTGAAGGGAGGTCCTCTGAGATATACAAAATTGACAGGTNAGGTTTATCATCAAGattgacatttaaaccaggaatatcagagagctgatcaaagagatcttgccgcatcgagtcaaactgggggcaatgcaggagaaagtgctcgttgtcttccttttcagtaccacaagcacaaaatggaGGGTACTTCCAACTGAAAGCTTTCCCTGGATCATTTTCGCTGAAACTCCGTGAAGGGAGGTCCTCTGAGATATACAAAATTGACAGAGCACAtttttaagtggcaaaaaatccgtcatcttaaaaaagtccaaaaatcactaaaatgggtactggaggagcaaattgggatgcacttgtaggaacctttagtcaaagCATTGAGGGCAGTGATGATCATGCAGACGAAGGCCATGTCACTGTCACTGTTGACAGTCTTGAAGGAAGCTTTCTCAAGGCTAAGGTTTCACGTAATCCTGGTAAAGATAGCGAAGATCTATTATCAGGAGATGATAAATCCAAAGGAATCTGGGATTCGATTACAAGTTACGTGAACAAAGATCACGAAGACATTGGTAAAAATGGGACTGTTCATATATTTTCAGTTGCGACTGGTCGTCTTTATGAAAGATTCCTCAGAATCATGATGTTGACAGTTTTAAAGCACACGAAAAATCCTGTCAAGTTCTGGTTTTTGAAAAATTATCTTTCTTCTACTTTCATGAGTTTTCTTCCATACATGGCTAAAGAGTACAACTTTGATTATGCTCTGGTTCAATATCAATGGCCAAGCTGGTTACACCGACAGACAGACAAGCAAAGAATCATATGGGGtgcagaagagaaaaggatataaaatgtgaaaactgatactaagaaaaataaacaatgtaaaatattgaaaaacaagggagggtaatgccaaccccacccccccaaggcccacagcaaattgttactaatattattaAATCAGCAACCAtttcacttgtccacttgaatggcttcctttttctggaattttcttcacctctattcgcttttgccgtggtttgttttgattttgagcgcgaagatttgttgtccgccattgtcgattcggtgatggaaaactggtttggcgccaacttttttgcgcatgcgtatatccgtcatttccagcccacctgggtgagccagcccacctgatcgcgtttacatgatcaattctcatcccacctgacgtggatcccaccagcctttctcacggatctcaccaaggtgggctggcccaccaccctccatgtaaacgtaactgcagattaacaaaggactgtattgaat

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18404 all species →	Glyco_transf_24	Glucosyltransferase 24	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040497 all species →	Domain	Glucosyltransferase 24, catalytic domain	Interproscan
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR009448 all species →	Family	UDP-glucose:Glycoprotein Glucosyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11226 all species →	UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003980 all species →	Molecular Function	UDP-glucose:glycoprotein glucosyltransferase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006486 all species →	Biological Process	protein glycosylation	Interproscan
GO:0018279 all species →	Biological Process	protein N-linked glycosylation via asparagine	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0071712 all species →	Biological Process	obsolete ER-associated misfolded protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold126.g12.t4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.