Gene detail

Detailed information of scaffold132.g7.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold132:77774...107094
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold132.g7.t2

agcgcactgttttggtttctctcgaagatcaaaatggccgaaagaggaacgacttcgaattcaccccaagtttcgagtcgaagtagcagcagaagagatatatttgaagcatccaatgacattgaaggagatttaaatgaaagtggaagagaattatttgaagcatgccgaactggagacgtcaacaaagttaccagccttgttcaaaatgaatggagtgtcaatatgcgagatacggcaggcaggaaatcaactcctttgcattttgccgcagcactcactagtgctagtgcccagatccttttggaaaacgcactgttttggtttctctcgaagatcaaaatggccgaaagaggaacgacttcgaattcaccccaagtttcgagtcgaagtagcagcagaagagatatatttgaagcatccaatgacattgaaggagatttaaatgaaagtggaagagaattatttgaagcatgccgaactggagatgtcaacaaagttaccagtcttgttcaaaatgaatggagtgtcaatatgcgagatacggcaggcaggaaatcaactcctttgcattttgccgcagggtttggaagaaaggacattgttgaattcttgctgcaaaatggtgctgatgtacatgctagagatgatggtggcctgataccattacacaatgcatgttcttttgggcatgttgaagtaactttgttattgttgaggcacaatgctgatgttaatgcaagggacaattggaattacactccattacatgaagctgcaactaaaggaaaagttgatgtatgtttagtgttgcttcaacatggtgcagatccaagtatcagaaacacagatggaaaaacggctggtgatcttgccgagcctactgccaaacttgttttgacaggtgaatacagaaaagatgaactactggaggctgcaagatctggttgtgaagagaaaatgaagctgttgctcacaccaataaatgtaaattgtcatgcaagcgatggaagaaagtcaactccattacatcttgctgctggttacaacagaattcgcattgttgaaatgttattagcgagtggtgctgatgtgcatgccaaggataaaggtggacttgtaccattacacaatgcctgttcatatggacattatgaagttactgagcagttagtcaagcatggtgccagtgtaaatgcaatggacttatggcaatttacgccattacacgaggcagcttcaaagtctagaattgaagtatgtacatttttgctgagttacaatgcagatcctaccattgtgaattgtcattcgaagagtgctattgatgttgcaccaacacaagaattaaaggaaaaattgttttttgaattcagaggaaacagtttcttagatgctgtaaaatcttgcgatatgggaagagtaaagaaaacatttgcacaggatttgatttcatttcaacatccatatacccaagatatggcacttcactatatagcaatgtcacacatacagaaaagaagaaatgtggctgaatttttaatcaaaaagggtgtagatacaaatgccaaaaataaagagaaaatgacaccgcttcatgtggcttgtgaaaatggcttatccgatattgtcacattattactcaaaagtggaacagaggtgaatgatttggataactttggacagacacctcttcatcgaagtgctcaaaatggacatgttgcaatttgtgaattattactggaaaatggtggtgatgcatcgatatgttctcttcagggatatacagcagcacaaattggcagtgaggctgccaaaaaattgttacaagcgtctcaagaaccaacagcaaaggatactgataaacaattattagaagctgcaaaatcaggagacatggacatcttagaaagaattacaacacctcaaactgttaattgtcaagatatcgatggtcgtcattccactcctttacatttcgctgctggttataatcgattgaatgttgtcatgtttttattacaaagtggagctgatgttcatgctaaagataaagggggacttgttcctttgcataatgcatgttcttatggtcattatgaagttgcagagcttcttgtcaagcatggtgcaaatgttaatgctgcagatttgtggaaattcacgcctttgcacgaagctgcagccaaaggaaaatttgaaatttgtaaacttttgctcgggcacggtgcggatgcgcaaaagaaaaatcgagatggtcacactccatcggatcttgttaaagaatgcttcccagatgttattgatttattaagaggagatgctgctttacttgaggccgcaaaaaaaggaaatatgcctaaggtgatgaaacttgttacaagagacaatatcaactgtcgtgatacacaaggaaggaattcaacaccccttcatctagctgcgggatataaccatcttgaagttgcagagtttttactcgagaaaggtgctgatgtgaatgcgcaagacaaaggaggcctcattccattgcataatgcttcatcttatgggcatgtggacattgcagcattgctcataaaatacaaaggaaatgtgaatgcaactgatcgatggctgtttactcccttacacgaggcagctcaaaaaggacgcacacaattatgtgctttacttttgacacatggtgctgattcacatatgaagaaccaagaaggacacacaccgcttgatgttgctacgcaagatgacgtcaaaatcctcctccaggatgccatgacaagcaaatcacaagtgacgcagatccctgcaagaccagccattccgacaccatctgctggtgcctctgcgcaggctgcatcatccacgcagtcatcagcatccagcagcacaagcacgcaatcatgtatgacgcaaccatcagcagccaatcagagtctgttgaaagccaatccagtgggtggtgccagtgatgctgtttctgctgttagatctaaagtcgaggctgaaggtcatagttcgatggaagttgacatcgtagaatttttagcaacatcgcaactagaacacttgcgggagatattcgaaaaagagaagataacaatggatgttcttattgacatgggccatgaagaattgaaagaagttggtattgttgcatatggacatcgacataaattactaaaagctgttaaagaaagacttgggggcactggctgtaccactgttggcgttccatttccttcgacaataacaggcggtggaaatgcaactattcttcaagaattgtcgaattatgacaaagactttgtttctgtttgtcatgagatccagtcaacaatagttgaacataaagatggcggagctgccggtggtatttttaaatcatacacaattattaaggtcgagagagttatcaacaaaaagttgtgggaaagatatgcgtatcgtcggagagaggttgctgagagcaatcataataatccaaacgagagaatgttgtttcacgggtcgccatttgtcaatgcaatcgtgcaaaaaggtttcgatgaacgacatgcttacattggagggatgtttggagctgggatttattttgctgaacattccagtaaaagtaatcaatatgtatatggaatcggaggtggatcggggtgtccattacataaagatcgttcatgttatgaatgccataggcaaataattctgtgtcgcgtaacacttggcaaaccgttctttcaatttacggcggtgaaaatggcacatgctccaccaggacaccattcagtcgttggtaaaccaaactctggtggcctctcttatcctgaatatgttgtttatcgaggagaacaggcgtatccagaatatctgataacatacagaatcgatcgaatcgaatcagacagtgcgcagaaaaacgtcatgagtgtttcttaagatatgaattaacttcagtcaatatttgacttaaaatgtcagtatttagagacattaggattgtgtcttattcattgttaagtcttgcgtattacgtttctgtacaatagaagttagtcattggaaagcgaattgaaaaatgtcgaaagttaaaaataattgaatgtttattggggatcaattttctcatctatataacgttttactgtatgaaacgatagtgtgttcagatgttcccttcatcatacagtgtcatcaattttcaagcgaattagcgatgaaactacatctcatacatgtacaacagaaatacgtttacatgaaacagattcaattcaatctcaattcaatctcaattcaattcaatctcaattcaattcaatctcaatgcaacaaaggtatcaatcaaatgtctgcatatcctactcaaaaattaactgagcttgcatttcctgctaaaaaagagaatccaaatttttacgatttgaatcactctgaaatctggttcgttatttacataatattccagtgtgttagctcaantgttgagggtacaggtatgtgccactcatacttaatcaaattttggtaattagaacatagaagtgggtagttttctgaaagccgggaagcaggccccagtccattcataaatcactctacctcccccccccaggccagagccacacctaatacattctggtataaactgccccaattgggatattgtgttgcaagtatgttcccaaaactctaacaaggccaaggcaatacagtttattgcttgctcttaggcatctggcagcccagtggctgtaataaaagttgcagcctgaaagacaacgttccccttatttcctgcagtgcaaacaatatccttccttttgactgaatatggctgatagaaggtctcaaattaaataagtgctgaccagaattgttcttcaaccggcccacggtctatcggcacatgtattttgcagcgggcctagcagtatggggcaataactgctattcattgaaagagcattgtcgcgttacagtagcatcaaattctaaaataacttttcacaaaatgaacaatggtagtatcatttccaagataagacgttgaagtaaagcactcatgaatgcataatccgcaaagtgaaatgctgcaagaatgacaagtcatctcgctgctccacctccatctttgtgtctgaacgcaacgcgcgaagtctccgctcgcggaagacaaacgaaaacgaggctttcatttctgctgagtcatggaaaggctaaatggactttgttgcgcagactctatactttcgaggagttgagtctgcacgcaggctattttcaagcgaattagcgatgaaactacatctcatacatgtacaacagaaatacgtttacatgaaacagattcaattcaatctcaattcaatctcaattcaattcaatctcaattcaattcaatctcaatgcaacaaaggtatcaatcaaatgtctgcatatcctactcaaaaattaactgagcttgcatttcctgctaaaaaagagaatccaaatttttacgatttgaatcactctgaaatctggttcgttatttacataatattccagtgtgttagctcaatttattcattttcacttcagtaccattttgtgctgaatgagatggcatactgtgcgagtaaaagagtacagtccccgtttggaaagccactactccccgacagctccctatcaaggcaataacattggcaagtatatatttcaataatggacatgttcaaatagatttcaaaatttacctgactgaaatcagctactccgctctgaaattatgagcgactttctcaagaaaacccttgatgaaac

Transcript

scaffold132.g7.t2

AGCGCACTGTTTTGGTTTCTCTCGAAGATCAAAATGGCCGAAAGAGGAACGACTTCGAATTCACCCCAAGTTTCGAGTCGAAGTAGCAGCAGAAGAGATATATTTGAAGCATCCAATGACATTGAAGGAGATTTAAATGAAAGTGGAAGAGAATTATTTGAAGCATGCCGAACTGGAGACGTCAACAAAGTTACCAGCCTTGTTCAAAATGAATGGAGTGTCAATATGCGAGATACGGCAGGCAGGAAATCAACTCCTTTGCATTTTGCCGCAGCACTCACTAGTGCTAGTGCCCAGATCCTTTTGGAAAACGCACTGTTTTGGTTTCTCTCGAAGATCAAAATGGCCGAAAGAGGAACGACTTCGAATTCACCCCAAGTTTCGAGTCGAAGTAGCAGCAGAAGAGATATATTTGAAGCATCCAATGACATTGAAGGAGATTTAAATGAAAGTGGAAGAGAATTATTTGAAGCATGCCGAACTGGAGATGTCAACAAAGTTACCAGTCTTGTTCAAAATGAATGGAGTGTCAATATGCGAGATACGGCAGGCAGGAAATCAACTCCTTTGCATTTTGCCGCAGGGTTTGGAAGAAAGGACATTGTTGAATTCTTGCTGCAAAATGGTGCTGATGTACATGCTAGAGATGATGGTGGCCTGATACCATTACACAATGCATGTTCTTTTGGGCATGTTGAAGTAACTTTGTTATTGTTGAGGCACAATGCTGATGTTAATGCAAGGGACAATTGGAATTACACTCCATTACATGAAGCTGCAACTAAAGGAAAAGTTGATGTATGTTTAGTGTTGCTTCAACATGGTGCAGATCCAAGTATCAGAAACACAGATGGAAAAACGGCTGGTGATCTTGCCGAGCCTACTGCCAAACTTGTTTTGACAGGTGAATACAGAAAAGATGAACTACTGGAGGCTGCAAGATCTGGTTGTGAAGAGAAAATGAAGCTGTTGCTCACACCAATAAATGTAAATTGTCATGCAAGCGATGGAAGAAAGTCAACTCCATTACATCTTGCTGCTGGTTACAACAGAATTCGCATTGTTGAAATGTTATTAGCGAGTGGTGCTGATGTGCATGCCAAGGATAAAGGTGGACTTGTACCATTACACAATGCCTGTTCATATGGACATTATGAAGTTACTGAGCAGTTAGTCAAGCATGGTGCCAGTGTAAATGCAATGGACTTATGGCAATTTACGCCATTACACGAGGCAGCTTCAAAGTCTAGAATTGAAGTATGTACATTTTTGCTGAGTTACAATGCAGATCCTACCATTGTGAATTGTCATTCGAAGAGTGCTATTGATGTTGCACCAACACAAGAATTAAAGGAAAAATTGTTTTttgaattCAGAGGAAACAGTTTCTTAGATGCTGTAAAATCTTGCGATATGGGAAGAGTAAAGAAAACATTTGCACAGGATTTGATTTCATTTCAACATCCATATACCCAAGATATGGCACTTCACTATATAGCAATGTCACACATACAGAAAAGAAGAAATGTGGCTGAATTTTTAATCAAAAAGGGTGTAGATACAAATGCCAAAAATAAAGAGAAAATGACACCGCTTCATGTGGCTTGTGAAAATGGCTTATCCGATATTGTCACATTATTACTCAAAAGTGGAACAGAGGTGAATGATTTGGATAACTTTGGACAGACACCTCTTCATCGAAGTGCTCAAAATGGACATGTTGCAATTTGTGAATTATTACTGGAAAATGGTGGTGATGCATCGATATGTTCTCTTCAGGGATATACAGCAGCACAAATTGGCAGTGAGGCTGCCAAAAAATTGTTACAAGCGTCTCAAGAACCAACAGCAAAGGATACTGATAAACAATTATTAGAAGCTGCAAAATCAGGAGACATGGACATCTTAGAAAGAATTACAACACCTCAAACTGTTAATTGTCAAGATATCGATGGTCGTCATTCCACTCCTTTACATTTCGCTGCTGGTTATAATCGATTGAATGTTGTCATGTTTTTATTACAAAGTGGAGCTGATGTTCATGCTAAAGATAAAGGGGGACTTGTTCCTTTGCATAATGCATGTTCTTATGGTCATTATGAAGTTGCAGAGCTTCTTGTCAAGCATGGTGCAAATGTTAATGCTGCAGATTTGTGGAAATTCACGCCTTTGCACGAAGCTGCAGCCAAAGGAAAATTTGAAATTTGTAAACTTTTGCTCGGGCACGGTGCGGATGCGCAAAAGAAAAATCGAGATGGTCACACTCCATCGGATCTTGTTAAAGAATGCTTCCCAGATGTTATTGATTTATTAAGAGGAGATGCTGCTTTACTTGAGGCCGCAAAAAAAGGAAATATGCCTAAGGTGATGAAACTTGTTACAAGAGACAATATCAACTGTCGTGATACACAAGGAAGGAATTCAACACCCCTTCATCTAGCTGCGGGATATAACCATCTTGAAGTTGCAGAGTTTTTACTCGAGAAAGGTGCTGATGTGAATGCGCAAGACAAAGGAGGCCTCATTCCATTGCATAATGCTTCATCTTATGGGCATGTGGACATTGCAGCATTGCTCATAAAATACAAAGGAAATGTGAATGCAACTGATCGATGGCTGTTTACTCCCTTACACGAGGCAGCTCAAAAAGGACGCACACAATTATGTGCTTTACTTTTGACACATGGTGCTGATTCACATATGAAGAACCAAGAAGGACACACACCGCTTGATGTTGCTACGCAAGATGACGTCAAAATCCTCCTCCAGGATGCCATGACAAGCAAATCACAAGTGACGCAGATCCCTGCAAGACCAGCCATTCCGACACCATCTGCTGGTGCCTCTGCGCAGGCTGCATCATCCACGCAGTCATCAGCATCCAGCAGCACAAGCACGCAATCATGTATGACGCAACCATCAGCAGCCAATCAGAGTCTGTTGAAAGCCAATCCAGTGGGTGGTGCCAGTGATGCTGTTTCTGCTGTTAGATCTAAAGTCGAGGCTGAAGGTCATAGTTCGATGGAAGTTGACATCGTAGAATTTTTAGCAACATCGCAACTAGAACACTTGCGGGAGATATTCGAAAAAGAGAAGATAACAATGGATGTTCTTATTGACATGGGCCATGAAGAATTGAAAGAAGTTGGTATTGTTGCATATGGACATCGACATAAATTACTAAAAGCTGTTAAAGAAAGACTTGGGGGCACTGGCTGTACCACTGTTGGCGTTCCATTTCCTTCGACAATAACAGGCGGTGGAAATGCAACTATTCTTCAAGAATTGTCGAATTATGACAAAGACTTTGTTTCTGTTTGTCATGAGATCCAGTCAACAATAGTTGAACATAAAGATGGCGGAGCTGCCGGTGGTATTTTTAAATCATACACAATTATTAAGGTCGAGAGAGTTATCAACAAAAAGTTGTGGGAAAGATATGCGTATCGTCGGAGAGAGGTTGCTGAGAGCAATCATAATAATCCAAACGAGAGAATGTTGTTTCACGGGTCGCCATTTGTCAATGCAATCGTGCAAAAAGGTTTCGATGAACGACATGCTTACATTGGAGGGATGTTTGGAGCTGGGATTTATTTTGCTGAACATTCCAGTAAAAGTAATCAATATGTATATGGAATCGGAGGTGGATCGGGGTGTCCATTACATAAAGATCGTTCATGTTATGAATGCCATAGGCAAATAATTCTGTGTCGCGTAACACTTGGCAAACCGTTCTTTCAATTTACGGCGGTGAAAATGGCACATGCTCCACCAGGACACCATTCAGTCGTTGGTAAACCAAACTCTGGTGGCCTCTCTTATCCTGAATATGTTGTTTATCGAGGAGAACAGGCGTATCCAGAATATCTGATAACATACAGAATCGATCGAATCGAATCAGACAGTGCGCAGAAAAACGTCATGAGTGTTTCTTAAGATATGAATTAACTTCAGTCAATATTTGACTTAAAATGTCAGTATTTAGAGACATTAGGATTGTGTCTTATTCATTGTTAAGTCTTGCGTATTACGTTTCTGTACAATAGAAGTTAGTCATTGGAAAGCGAATTGAAAAATGTCGAAAGTTAAAAATAATTGAATGTTTATTGGGGATCAATTTTCTCATCTATATAACGTTTTACTGTATGAAACGATAGTGTGTTCAGATGTTCCCTTCATCATACAGTGTCATCAATTTTCAAGCGAATTAGCGATGAAACTACATCTCATACATGTACAACAGAAATACGTTTACATGAAACAGATTCAATTCAATCTCAATTCAATCTCAATTCAATTCAATCTCAATTCAATTCAATCTCAATGCAACAAAGGTATCAATCAAATGTCTGCATATCCTACTCAAAAATTAACTGAGCTTGCATTTCCTGCTAAAAAAGAGAATCCAAATTTTTACGATTTGAATCACTCTGAAATCTGGTTCGTTATTTACATAATATTCCAGTGTGTTAGCTCAANtgttgagggtacaggtatgtgccactcatacttaatcaaattttggtaattagaacatagaagtgggtagttttctgaaagccgggaagcaggccccagtccattcataaatcactctacctcccccccccaggccagagccacacctaatacattctggtataaactgccccaattgggatattgtgttgcaagtatgttcccaaaactctaacaaggccaaggcaatacagtttattgcttgctcttaggcatctggcagcccagtggctgtaataaaagttgcagcctgaaagacaacgttccccttatttcctgcagtgcaaacaatatccttccttttgactgaatatggctgatagaaggtctcaaattaaataagtgctgaccagaattgttcttcaaccggcccacggtctatcggcacatgtattttgcagcgggccTagcagtatggggcaataactgctattcattgaaagagcattgtcgcgttacagtagcatcaaattctaaaataacttttcacaaaatgaacaatggtagtatcatttccaagataagacgttgaagtaaagcactcatgaatgcataatccgcaaagtgaaatgctgcaagaatgacaagtcatctcgctgctccacctccatctttgtgtctgaacgcaacgcgcgaagtctccgctcgcggaagacaaacgaaaacgaggctttcatttctgctgagtcatggaaaggctaaatggactttgttgcgcagactctatactttcgaggagttgagtctgcacgcaggctaTTTTCAAGCGAATTAGCGATGAAACTACATCTCATACATGTACAACAGAAATACGTTTACATGAAACAGATTCAATTCAATCTCAATTCAATCTCAATTCAATTCAATCTCAATTCAATTCAATCTCAATGCAACAAAGGTATCAATCAAATGTCTGCATATCCTACTCAAAAATTAACTGAGCTTGCATTTCCTGCTAAAAAAGAGAATCCAAATTTTTACGATTTGAATCACTCTGAAATCTGGTTCGTTATTTACATAATATTCCAGTGTGTTAGCTCAATTTATTCATTTTCACTTCAGTACCATTTTGTGCTGAATGAGATGGCAtactgtgcgagtaaaagagtacagtccccgtttggaaagccactactccccgacagctccctatcaaggcaataacattggcaagtatatatttcaataatggacatgttcaaatagatttcaaaatttacctgactgaaatcagctactccgctctgaaattatgagcgactttctcaagaaaacccttgatgaaac

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00644 all species →	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan
PF13637 all species →	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF07647 all species →	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR012317 all species →	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24178 all species →	MOLTING PROTEIN MLT-4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003950 all species →	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0097543 all species →	Cellular Component	ciliary inversin compartment	Interproscan
GO:1904108 all species →	Biological Process	protein localization to ciliary inversin compartment	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10799	TNKS; tankyrase	EC:2.4.2.30	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.