Detailed information of scaffold134.g46.t1 in Aurelia aurita

Genomic Location: scaffold134:628532...636679
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI1 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372
all species →		Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00102
all species →		Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000387
all species →		DomainTyrosine-specific protein phosphatases domainInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR036514
all species →		Homologous_superfamilySGNH hydrolase superfamilyInterproscan
IPR000242
all species →		DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR005135
all species →		DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR029021
all species →		Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR003595
all species →		DomainProtein-tyrosine phosphatase, catalyticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46670
all species →		ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016311
all species →		Biological ProcessdephosphorylationInterproscan
GO:0004725
all species →		Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0006470
all species →		Biological Processprotein dephosphorylationInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold134.g46.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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