Gene detail

Detailed information of scaffold1345.g6.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold1345:66487...72974
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00491 all species →	Arginase	Arginase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023696 all species →	Homologous_superfamily	Ureohydrolase domain superfamily	Interproscan
IPR006035 all species →	Family	Ureohydrolase	Interproscan
IPR020855 all species →	Binding_site	Ureohydrolase, manganese-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11358 all species →	ARGINASE/AGMATINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0016813 all species →	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	Interproscan
GO:0008783 all species →	Molecular Function	agmatinase activity	Interproscan
GO:0033389 all species →	Biological Process	putrescine biosynthetic process from arginine, using agmatinase	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27001	GDAH, AGMAT; taurocyamine/4-guanidinobutanoate/3-guanidinopropanoate hydrolase	EC:3.5.3.- EC:3.5.3.7 EC:3.5.3.17	Arginine and proline metabolism	ko00330	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.