Gene detail

Detailed information of scaffold135.g4.t1 in Morbakka virulenta

Genomic Location: scaffold135:245306...257828
NR annotation: AHX03094.1, optix, partial [Aurelia sp. 1 NN-2010a]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
O93307	Homeobox protein SIX6 OS=Gallus gallus OX=9031 GN=SIX6 PE=2 SV=1
O95475	Homeobox protein SIX6 OS=Homo sapiens OX=9606 GN=SIX6 PE=1 SV=2
Q9QZ28	Homeobox protein SIX6 OS=Mus musculus OX=10090 GN=Six6 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16878	SIX1_SD	Transcriptional regulator, SIX1, N-terminal SD domain	Domain	Interproscan
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR031701	Domain	Homeobox protein SIX1, N-terminal SD domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10390	HOMEOBOX PROTEIN SIX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19473	SIX3_6, OPTIX; homeobox protein SIX3/6	-	Transcription factors	ko03000	deepkoala