Detailed information of scaffold1399.g3.t3 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold1399:16166...42390
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity|HECT · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632
all species →		HECTHECT-domain (ubiquitin-transferase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000569
all species →		DomainHECT domainInterproscan
IPR035983
all species →		Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR044611
all species →		FamilyUbiquitin-protein ligase E3A/B/C-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45700
all species →		UBIQUITIN-PROTEIN LIGASE E3CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000209
all species →		Biological Processprotein polyubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold1399.g3.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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