Gene detail

Detailed information of scaffold14.g46.t1 in Morbakka virulenta

Genomic Location: scaffold14:2173506...2196122
NR annotation: XP_015764162.1, PREDICTED: piwi-like protein 1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold14.g46.t1

CCTGAATTGTGTGCTATGACTGGATTGACAGACAGGATGAGACAAGATTTTCGAGTTATGAAAGATATTGCTGTTCATACCAGAATTAACCCGTCGGAGAGATATCAAAGCCTGCTCACATTTATTGAAAATGTTAACAAGAACCCAGAGGCTGTTAACGAGTTAAAGTCTTGGGGGCTTCAACTTTCAAGCGATTTGTTCATGACCAAAGGCCGCCAAATGAAATATGAGAAGGTCAGCTTTGCTAATGGTTCTGTGGTGTTAACTTCAGAAGCAGATTTTGGAAAAGACGTCACAAGACACGATGTCGTCACCGCTGTTGATTTACGCAGATGGATGCTAGTATTCACAAGAAGAGATGAACGAAAGGCGATGGATTTTAAGAACACCCTACTAAAAGTGGCCCCTCAAATTGGTATTAAGGTCAGTGACCCATCAATAATAATGCTTCCAGACGAAAGAACTGTAACATATCTTAGAGCTATTAGGGAAAGCAAGCACCCTGAGACACAAATGGTAGTTGTGATATTTCCCACAGCTAGGGATGATAGGTATGCAGCCTTCAAAAAGCTATGCTGTATTGAACAGCCAGTACCGTCACAGGTGATCAATGCACGTACAATATCACAAGCTAACAAGCTGAGGTCGGTAACCCAGAAAATTGTTTTACAGATGAATGCCAAAATGGGAGGCGAATTATGGCGTCTTGATATACCCCTTAAAAGTGTTATGGTGGTTGGCATAGATGTCTATCACGATACAGTGGGTGGTAGACGATCCATTGGTGCTTTCGTCGCAAATTGTAACAAACAGCTCACTCGATATTACTCAAGAGTTTGCTTTCAGATGCCTGGTCAAGAGTTAATTGATGGTCTAAAACATTGCTTTACTGCGGCATTAAAGAAATTCCGTGAGAACGTCGGGATGCTACCGGAAAAAATCATTGTGTATCGTGATGGTGTTGGTGACAGTCAGCTCTCTGTAGTGGCGGATTATGAAGTTGAGCAACTATCCGAGTCTTTTGCTTTCTTTGGTAGTGAATACCAGCCAAAACTTGCAGTTGTAGTTGTTCAAAAACGAATAAACATGAGACTATTTACTGTTTTGAACTCTGGTCAGAAAGTACGAATGGAAAACCCAATGCCAGGTACTGTCGTGGATCATTCAGTGACAAGAAGAGATTGGTTTGACTTTTTCTTGGTCAGTCAACATGTTAGACAAGGCACTGTCACACCTACACATTACGTTGTTGTTCATGACAAATCGACACTAAAACCGGATCACATACAAAGATTAACATATAAACTTACGCATTTGTATTATAATTGGGCAGGAACAATTAGAACCCCAGCTCCATGCCAGTATGCCCACAAGTTAGCCTCTTTGACTGGCAAGGCATTGCACAAAGATCCTTCACTGGAACTAAGCGACAAATTGTTCTACCTATAAAAAAAGCGCCCTTATTATTTTATGGGCTTCGATGGCCTATTTATTTTATGGCTTCAATAAACAAGTCAATTATATATTAAATATATATTTGATCGGAAAAATATGCCCTTGATCATTTTATATATTGTATTGTTTTCCCCAGCTGCTTGAGAAATACCTATGAACAATTACGTAAAATTTACATACATGTGTCACGTTTTAGTGTAGTTTAACCAATTTGAATTTTCTTCGTACCTTTCATATAGCGATATTAGTCATTTATTGCTATTTAAGTTTTACAATTACTTTGCATTGGTTTATCTTCTGGATCAATCAGCCTAGGTTCTTTGGTATATGTTATGCCTTGATAGCAAGCCTTTCCGCTAAGACTGCCATTCACACGGTTGGTGTTTATTGCCAATCTTGTCGTTCTATATACTCTTCAAGGCAGAATTTCGGTGTTATAAAGCTTGCTTGAACATTCTTTTTTAACTTTTTCAGAGTTGTAAGGGTTGTTATAGTCCCACTGTAAATAAAACTAGGAAGCCATGTAATAGTGATTTTGGGATTCACTTCTTGTCAattattattattattattattattattattattattattattattattattattattatttgtgtttgctgctcaagagcaagcattgaggacaaggttggcgcagtcgaagtgggatggtggtgttagtcctatgtgtcgcatctgcggaattgaatctgagtcagtttggcatgttgcgtgtgggtgtaaggtactggctcagaaggagtacaagaggcgacatgataggatgggattgagaatatattgggcgctgtgca

Protein

Uniprot

Uniprot term	Description
A9ZSZ2	Piwi-like protein Ago3 OS=Bombyx mori OX=7091 GN=AGO3 PE=1 SV=2
A8KBF3	Piwi-like protein 2 OS=Xenopus tropicalis OX=8364 GN=piwil2 PE=1 SV=1
Q8TC59	Piwi-like protein 2 OS=Homo sapiens OX=9606 GN=PIWIL2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02171	Piwi	Piwi domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003165	Domain	Piwi domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22891	EUKARYOTIC TRANSLATION INITIATION FACTOR 2C	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004521	Molecular Function	RNA endonuclease activity	Interproscan
GO:0031047	Biological Process	regulatory ncRNA-mediated gene silencing	Interproscan
GO:0034584	Molecular Function	piRNA binding	Interproscan
GO:0043186	Cellular Component	P granule	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02156	AUB, PIWI; aubergine	-	Chromosome and associated proteins	ko03036	deepkoala