Gene detail

Detailed information of scaffold146.g32.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold146:356450...368774
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold146.g32.t2

ttattttttcaaatctgatatggtttcagaggaacatagttaaaagaaatgtcatgtcattacaaggaaatgttcgaacgaaagaaaaatttaagcaattataacaataagaatgttcttaacaatcataaaattttaaacaacaacaaaatgtttcataaacatcgcaaaacaggcaactgctgaaaaatgaaactcaaatatgcgagctgaggctgagcaatattcttaaaaattggatgattctgagcctaaagatttggaatattctcataaacattattcttatgaaaaaagtgtagtgtgtgcagtttctcgcttttttggggcctttagaacacaaagtaagattttttgtgtcattatttacattttttaagcgactgaaaccaatttaaacaagttggcactacattgtacagttgtaatcgcttccccattgcactatgagaattgtatttctcttaaaaagccacccccattccaaatgctgtgctagcaatgtaaagctttaagactgcatgtcaaactttatagaactgtagagtctggaaaaaggtcaaacattccatggttgccaatttcgttgaataaccttcatgattttatcaagtacaaataaaccatttttttggagcttcttgtccctcgcgtcgtttctaaccctaaaatttataaaccatttgaagctgccaaagtatcccaagattttcttataaaaattactaaaacctaaaaccttcctcgaatatgatatttacaagtaaagctttctgtagtcccagtcccagttatagtcccagttatcgcagcaacaacaacgaaaatgacaaaaacaacaacaacaacaacaacaacacattttttcgctcgaactggctataacatctatatagctcaacctggctacagcaagttatagcgtccatcagtctatcaatagcaataactacgaacttgtaatcagtcttagcctgcgcgcagcctcaacacacctcaagtatagacctttccggaggagtgttgaggctgcgcgcaggctaatcagtctagaccctgtatataacttatatagttaagagttttggttgcattctcccacatttctgtagctgaattcacatgtaacgcgttttccttgatgcagctgaaacaaggctggaattctgtaacacaaaaaccttacttggacaaatgcaagtcttatatggacagcggcatcaaaacgcctcacttgaaccatagtcatacttcaactcagcttaaggcgctggaagccttgtaaatatttaactttatattgtagaatgatgacgccctccctatcctcgttctttccccacataccactcactacaaaacctcgtgcaccaaagattcgcatagccatcgcttcaaaataacattacttataaacaaagtgatattattgacactactcgtgtgggcctagatatatatatatatgttttttgttacctcgttttttcatcaatgtctttccctttctggcttactgctgcccatgcctgatacaagcttccgtgatcccggttgcatatggagtgttggtggtccagcgccaaccggttctgcaaagtcccatccgggtgtttgtgagccagtcgatagtgccaaatgcaagtcacaaacttggatctcctgttctggtatgaaagccaattgcagtggaagaactgagcctggtgtaaagacacacaccattagattcccaaaatggaatgtgcctgctcaagagacaacatacttctgcaaaacattccaattgccacatgatcaagattatcacatcgtagcaactgagcccgttcttgacaacagaaaagtcattcatcacatgattttatatggctgcactgaagatgttaccattgagaaggagccgtttaattgcataatgggaagttccagatgcaaagatatgctggcagggtggactgttggacaggagggtagctgtgccccgtcaatggctgcagtgcggattggtaaatccatgtacaaatacgctcaattacaagttcactggacaaatgacagaaaattatcaaacttgtacgattcatctggtattcaacttttctacactccaaacctgagaaaatatgatcttggaaccatgatagctggacaacttcatcttgagttaccccccggaaaaagcgagattgtcacaaaaggcatttgtccagctggttgtactaaaacgatgctagacgggcatggccctgtcaacatcacaggagcaaatttacatgcgcacttccttggcaagaatctatcacttgcgcaatatcgaaacggcaaattcatccgatacctcgcaaaagatgatgtgttcagctacaacaaccccacatctacaaatttcaacccccctgtgacgttgcttcccggagatgagttacgaaccacgtgtatttatgacacgaagaagaaggcaaaaactacatattacggagatggtacctacgatgaaatgtgcttcgcttttatgaattattatcccaagatgaataggtcaagaagaaacctgtgcttatcgtatgaaaggtatccattgtgtgattggctgattcaccgtaaccttacattctacaaacatggttttggcacatgttacttcaaagaattcaccgagaacaacatacctaatgttcttcgttcctgtgagccgcacaagaaaacatgttccaaagactgcaaattctacatcgacaagatgaattcccatcgctgcatgaaaggatacgaaaggaaaatttacaacggcctgatgtggcaaaatgataccaaaatagcgacggctgtgtttcaagcaagaggtttatgcgcaaagagtgtggtccctgccactgcaatgttggtccaaccattcacaattctggctggtttcatgacccttgtggctctttttatgatgcttgaattctaatgagcattacacaggggcacactttcatacatttatcataaagctggttatttgtatttttgtagaacttctactttttacttcacctttcgtctttatgcatttattaagcctgttttccaccagggcaaatgtagcacgccgggggttggggggggagggtacataacatgttcagggtacgggtatgtgccgcccatacgggtgggtttttgggccaaaaactctctaaacaagggcccttttcggcagagttttttcacaaacatgggtggggtttcgctcacattcgcaaaaaatgatttaaaatgggcaattttccgccaaaattcatcatagaagtgtgtaccaaggcaaatttcggtaattagaagagggcagctttctgaaaaccgggcggcagacccccgtgaacccacaagtcatgtaaactttggtaacattggtaacttttaattttcttgatttttctgataattcaaaaacgtttctgtttgcaccgaaaaagaagaaatcctggtcgctcgctagctgttgaatacttctaccttaaacatagatattattgaaaaggccaagacgaaacttccttcatccttcctcagtcagatgctggcgaacgatttcttccttgaaaacaaaccttcaaaatgagtcagttttacctttatttgggggccttgatttgaaaaagagaagaacagaagaactgagattttaaagttgcgcatttgaaaaggacaatttcatagtctcccaagggaacctaatttgcatgaaaaacaaggaatctattcaagctgatgttctgaaatgaagacaaaaactaagaaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcggtacatcaatcaatcaactattcagttaatgcttacaataaacactgagacgaaatcactgatatatgaatagtgaaaatacagtaaaaccactaacattgaaattttaaataaaccacactaccgggttaaccagaaaaaagttcccacttttgaaacttcatagcattatgagtactgaatggattggaatgaatcaatatttgcttgacagccaaaagattgaagtgtttttgtgatttttcttgccttcttacgagcactggaaaaattggtaaattcaaatttagaaaaactttgtggttgcaaaatgactgaaaaaggcctaaaatacatgatcaaatcataaaggactcctcgctcagaatacaacagagaaaatgcagttactcttgggtaagagatatcgtcagcacatttattgccatgggattgaaaatctttattatctgtttgagaatctatgtctcattactcttgagagaggtgaacgccctagtgtattgttctgtgtgaggagagttctaacaatttgatcaagtgctttagccccttttcagtcatttggaaaacatgaaatttttgtaaagttgaatttagaatgaggaatcatgtcatgcagacagtcacttgaggattcgtacaatatcctgatctctcctgaggatcgattattcttaaatggtgatgagcataaaggtgaagttttaactttttagcacaggaagccccccccccccaataatttgctgaagttcgttcacttttgtacgtgaaaaaggctgcgaaagccaaacccttaaaaataaagattcaaacttattgttattcgaggaagttaccagaatgtatcaaaccatcacttttgatattatgcaattcaaaaacgatccatattctcgtgaacttgaagtcatatcttcgaaattttcgcggcaagaccctcaacagtcatgatcgtgtgcttctttaacacgcaaaagcctggttttcattagagtcataagaatcataagagtcacaagaaacataattttgaaatcttatgatgcttacgatccttatgaattcgttgttttcactgcatcataacgatcgtaagaaacataattttcctca

Transcript

scaffold146.g32.t2

ttattttttcaaatctgatatggtttcagaggaacatagttaaaagaaatgtcatgtcattacaaggaaatgttcgaacgaaagaaaaatttaagcaattataacaataagaatgttcttaacaatcataaaattttaaacaacaacaaaatgtttcataaacatcgcaaaacaggcaactgctgaaaaatgaaactcaaatatgcgagctgaggctgagcaatattcttaaaaattggatgattctgagcctaaagatttggaatattctcataaacattattcttatgaaaaaagtgtaGTGTGTGCAGTTTCTCGCTTTTTTGGGGCCTTTAGAACACAAAGTAAGATTTTTTGTGTCATTATTTACATTTTTTAAGCGACTGAAACCAATTTAAACAAGTTGGCACTACATTGTACAGTTGTAATCGCTTCCCCATTGCACTATGAGAATTGTATTTCTCTTAAAAAGCCACCCCCATTCCAAATGCTGTGCTAGCAATGTAAAGCTTTAAGACTGCATGTCAAACTTTATAGAACTGTAGAGTCTGGAAAAAGGTCAAACATTCCATGGTTGCCAATTTCGTTGAATAACCTTCATGATTTTATCAAGTACAAATAAACCATTTTTTTGGAGCTTCTTGTCCCTCGCGTCGTTTCTAACCCTAAAATTTATAAACCATTTGAAGCTGCCAAAGTATCCCAAGATTTTCTTATAAAAATTACTAAAACCTAAAACCTTCCTCGAATATGATATTTACAAGTAAAGCTTTCTGTAGTCCCAGTCCCAGTTATAGTCCCAGTTATCGCAGCAACAACAACGAAAATGacaaaaacaacaacaacaacaacaacaacaCATTTTTTCGCTCGAACTGGCTATAACATCTATATAGCTCAACCTGGCTACAGCAAGTTATAGCGTCCATCAGTCTATCAATAGCAATAACTACGAACTTGTAATCAGTCTTAGCCTGCGCGCAGCCTCAACACACCTCAAGTATAGACCTTTCCGGAGGAGTGTTGAGGCTGCGCGCAGGCTAATCAGTCTAGACCCTGTATATAACTTATATAGTTAAGAGTTTTGGTTGCATTCTCCCACATTTCTGTAGCTGAATTCACATGTAACGCGTTTTCCTTGATGCAGCTGAAACAAGGCTGGAATTCTGTAACACAAAAACCTTACTTGGACAAATGCAAGTCTTATATGGACAGCGGCATCAAAACGCCTCACTTGAACCATAGTCATACTTCAACTCAGCTTAAGGCGCTGGAAGCCTTGTAAATATTTAACTTTATATTGTAGAATGATGACGCCCTCCCTATCCTCGTTCTTTCCCCACATACCACTCACTACAAAACCTCGTGCACCAAAGATTCGCATAGCCATCGCTTCAAAATAACATTACTTATAAACAAAGTGATATTATTGACACTACTCGTGTGGGCCTAGATATATATATATATGTTTTTTGTTACCTCGTTTTTTCATCAATGTCTTTCCCTTTCTGGCTTACTGCTGCCCATGCCTGATACAAGCTTCCGTGATCCCGGTTGCATATGGAGTGTTGGTGGTCCAGCGCCAACCGGTTCTGCAAAGTCCCATCCGGGTGTTTGTGAGCCAGTCGATAGTGCCAAATGCAAGTCACAAACTTGGATCTCCTGTTCTGGTATGAAAGCCAATTGCAGTGGAAGAACTGAGCCTGGTGTAAAGACACACACCATTAGATTCCCAAAATGGAATGTGCCTGCTCAAGAGACAACATACTTCTGCAAAACATTCCAATTGCCACATGATCAAGATTATCACATCGTAGCAACTGAGCCCGTTCTTGACAACAGAAAAGTCATTCATCACATGATTTTATATGGCTGCACTGAAGATGTTACCATTGAGAAGGAGCCGTTTAATTGCATAATGGGAAGTTCCAGATGCAAAGATATGCTGGCAGGGTGGACTGTTGGACAGGAGGGTAGCTGTGCCCCGTCAATGGCTGCAGTGCGGATTGGTAAATCCATGTACAAATACGCTCAATTACAAGTTCACTGGACAAATGACAGAAAATTATCAAACTTGTACGATTCATCTGGTATTCAACTTTTCTACACTCCAAACCTGAGAAAATATGATCTTGGAACCATGATAGCTGGACAACTTCATCTTGAGTTACCCCCCGGAAAAAGCGAGATTGTCACAAAAGGCATTTGTCCAGCTGGTTGTACTAAAACGATGCTAGACGGGCATGGCCCTGTCAACATCACAGGAGCAAATTTACATGCGCACTTCCTTGGCAAGAATCTATCACTTGCGCAATATCGAAACGGCAAATTCATCCGATACCTCGCAAAAGATGATGTGTTCAGCTACAACAACCCCACATCTACAAATTTCAACCCCCCTGTGACGTTGCTTCCCGGAGATGAGTTACGAACCACGTGTATTTATGACACGAAGAAGAAGGCAAAAACTACATATTACGGAGATGGTACCTACGATGAAATGTGCTTCGCTTTTATGAATTATTATCCCAAGATGAATAGGTCAAGAAGAAACCTGTGCTTATCGTATGAAAGGTATCCATTGTGTGATTGGCTGATTCACCGTAACCTTACATTCTACAAACATGGTTTTGGCACATGTTACTTCAAAGAATTCACCGAGAACAACATACCTAATGTTCTTCGTTCCTGTGAGCCGCACAAGAAAACATGTTCCAAAGACTGCAAATTCTACATCGACAAGATGAATTCCCATCGCTGCATGAAAGGATACGAAAGGAAAATTTACAACGGCCTGATGTGGCAAAATGATACCAAAATAGCGACGGCTGTGTTTCAAGCAAGAGGTTTATGCGCAAAGAGTGTGGTCCCTGCCACTGCAATGTTGGTCCAACCATTCACAATTCTGGCTGGTTTCATGACCCTTGTGGCTCTTTTTATGATGCTTGAATTCTAATGAGCATTACACAGGGGCACACTTTCATACATTTATCATAAAGCTGGTTATTTGTATTTTTGTAGAACTTCTACTTTTTACTTCACCTTTCGTCTTTATGCATTTATTAAGCCTGTTTTCCACCAGGGCAAATGTAGCACGCCGGGGGTTGgggggggagggtacataacatgttcagggtacgggtatgtgccgcccatacgggtgggtttttgggccaaaaactctctaaacaagggcccttttcggcagagttttttcacaaacatgggtggggtttcgctcacattcgcaaaaaatgatttaaaatgggcaattttccgccaaaattcatcatagaagtgtgtaccaaggcaaatttcggtaattagaagagggcagctttctgaaaaccgggcggcagacccccgtgaacccacaagtcatgtaAACTTTGGTAACATTGGTAACTTTTAATTTTCTTGATTTTTCTGATAATTCAAAAACGTTTCTGTTTGCACCGAAAAAGAAGAAATCCTGGTCGCTCGCTAGCTGTTGAATACTTCTACCTTAAACATAGATATTATTGAAAAGGCCAAGACGAAACTTCCTTCATCCTTCCTCAGTCAGATGCTGGCGAACGATTTCTTCCTTGAAAACAAACCTTCAAAATGAGTCAGTTTTACCTTTATTTGGGGGCCTTGATTTGAAAAAGAGAAGAACAGAAGAACTGAGATTTTAAAGTTGCGCATTTGAAAAGGACAATTTCATAGTCTCCCAAGGGAACCTAATTTGCATGAAAAACAAGGAATCTATTCAAGCTGATGTTCTGAAATGAAGACAAAAACTAAGAaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcggtacatcaatcaatcaaCTATTCAGTTAATGCTTACAATAAACACTGAGACGAAATCACTGATATATGAATAGTGAAAATACAGTAAAACCACTAACATTGAAATTTTAAATAAACCACACtaccgggttaaccagaaaaaagttcccacttttgaaacttcatagcattatgagtactgaatggattggaatgaatcaatatttgcttgacagccaaaagattgaagtgtttttgtgatttttcttgccttcttacgagcactggaaaaattggtaaattcaaatttagaaaaactttgtggttgcaaaatgactgaaaaaggcctaaaatacatgatcaaatcataaaggactcctcgctcagaatacaacagagaaaatgcagttactcttgggtaagagatatcgtcagcacatttattgccatgggattgaaaatctttattatctgtttgagaatctatgtctcattactcttgagagaggtgaacgccctagtgtattgttctgtgtgaggagagttctaacaatttgatcaagtgctttagccccttttcagtcatttggaaaacatgaaatttttgtaaagttgaatttaGAATGAGGAATCATGTCATGCAGACAGTCACTTGAGGATTCGTACAATATCCTGATCTCTCCTGAGGATCGATTATTCTTAAATGGTGATGAGCATAAAGGTGAAGTTTTAACTTTTTAGCACAggaagccccccccccccaataatttgctgaagttcgttcacttttgtacgtgaaaaaggctgcgaaagccaaacccttaaaaataaagattcaaacttattgttattcgaggaagttaccagaatgtatcaaaccatcacttttgatattatgcaattcaaaaacgatccatattctcgtgaacttgaagtcatatcttcgaaattttcgcggcaagaccctcaacagtcatgatcgtgtgcttctttaaCACGCAAAAGCCTGGTTTTCATTAGAGTcataagaatcataagagtcacaagaaacataattttgaaatcttatgatgcttacgatccttatgaattcgttgttttcactgcatcataacgatcgtaagaaacataattttcctca

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03712 all species →	Cu2_monoox_C	Copper type II ascorbate-dependent monooxygenase, C-terminal domain	Domain	Interproscan
PF01082 all species →	Cu2_monooxygen	Copper type II ascorbate-dependent monooxygenase, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008977 all species →	Homologous_superfamily	PHM/PNGase F domain superfamily	Interproscan
IPR024548 all species →	Domain	Copper type II ascorbate-dependent monooxygenase, C-terminal	Interproscan
IPR014784 all species →	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase-like, C-terminal	Interproscan
IPR000945 all species →	Family	Dopamine beta-hydroxylase-like	Interproscan
IPR000323 all species →	Domain	Copper type II, ascorbate-dependent monooxygenase, N-terminal	Interproscan
IPR036939 all species →	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10157 all species →	DOPAMINE BETA HYDROXYLASE RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0016715 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	Interproscan
GO:0004500 all species →	Molecular Function	dopamine beta-monooxygenase activity	Interproscan
GO:0004497 all species →	Molecular Function	monooxygenase activity	Interproscan
GO:0005507 all species →	Molecular Function	copper ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold146.g32.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.