Detailed information of scaffold15.g71.t1 in Morbakka virulenta

Genomic Location: scaffold15:3093837...3116865
NR annotation: 6GDY_A, Crystal structure of 2OG oxygenase JMJD6 (aa 1-343) in complex with Fe(II) and 2OG [Homo sapiens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PFM0Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Danio rerio OX=7955 GN=jmjd6 PE=2 SV=2
Q6NYC1Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Homo sapiens OX=9606 GN=JMJD6 PE=1 SV=1
Q5R6G2Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Pongo abelii OX=9601 GN=JMJD6 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050910FamilyJMJD6 family arginine demethylases/lysyl-hydroxylasesInterproscan
IPR003347DomainJmjC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12480ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006909Biological ProcessphagocytosisInterproscan
GO:0033749Molecular Functionhistone H4R3 demethylase activityInterproscan
GO:0106140Molecular FunctionP-TEFb complex bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11323JMJD6; histone arginine demethylase JMJD6EC:1.14.11.-
Chromosome and associated proteinsko03036deepkoala

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