Detailed information of scaffold1538.g2.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold1538:4520...78867
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12662
all species →
cEGFComplement Clr-like EGF-likeDomainInterproscan
PF07699
all species →
Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF02494
all species →
HYRHYR domainDomainInterproscan
PF00084
all species →
SushiSushi repeat (SCR repeat)DomainInterproscan
PF00431
all species →
CUBCUB domainDomainInterproscan
PF00354
all species →
PentaxinPentaxin familyDomainInterproscan
PF00754
all species →
F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00008
all species →
EGFEGF-like domainDomainInterproscan
PF07645
all species →
EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000436
all species →
DomainSushi/SCR/CCP domainInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR026823
all species →
DomainComplement Clr-like EGF domainInterproscan
IPR009030
all species →
Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR035976
all species →
Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR001759
all species →
FamilyPentraxin-relatedInterproscan
IPR000152
all species →
PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR011641
all species →
DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR000859
all species →
DomainCUB domainInterproscan
IPR018097
all species →
Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR003410
all species →
DomainHYR domainInterproscan
IPR000421
all species →
DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR003609
all species →
DomainPAN/Apple domainInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR035914
all species →
Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR001881
all species →
DomainEGF-like calcium-binding domainInterproscan
IPR049883
all species →
DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12916
all species →
CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0005112
all species →
Molecular FunctionNotch bindingInterproscan
GO:0007219
all species →
Biological ProcessNotch signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24469SVEP1; sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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