Gene detail

Detailed information of scaffold155.g2.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold155:7416...28857
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold155.g2.t2

ctttggtactgcaaagtatgtttttgagcaaaagcttccatgtttcgttgtacttgttgaagaagtgcttcatcaatttatgcttgccctcatctcggaaaaatttgcaagatttgtccatgaagttatgaacaagcaacgtgaagagagaaaagggctattctctgccgaattccagtttgacgtagaaacgaacttactggtattatctccaagaccggaatcatttctgagatccctacgactgagtttcgagaatgttcctgctgtcctgtctgaagtatgtgtccctatgttgttacaaatgaagtatgggagcgaagacacactgatgatcaaggagattgatggcaatagaagactcactgctgatgaattgagaattttgttgaattgtggtgccaaggaagcaaatgagacattaaagcagagtactgacattggtggcagaaggcagtcgtnacgtgaagagagaaaagggctattctctgccgaattccagtttgacgtagaaacgaacttactggtattatctccaagaccggaatcatttctgagatccctacgactgagtttcgagaatgttcctgctgtcctgtctgaagtatgtgtccctatgttgttacaaatgaagtatgggagcgaagacacactgatgatcaaggagattgatggcaatagaagactcactgctgatgaattgagaattttgttgaattgtggtgccaaggaagcaaatgagacattaaagcagagtactgacattggtggcagaaggcagtcgtcaggcaatgagcaaatacagccattgttgcacatggagccagagtttcaagacaacgatgcatctggggtatcaaggcaagaagcattgcaagaaagactagcagcaaacaaaatggtgcaagattgtacaaacctaatgaattcattgatgacgacagcttttaaagaagtagaaacatttgcagaagaacacaagtggattgcagctatacacaaatttgtgataacatggaacagcaagacaatgcagtcatggaaaggccaaactgcttctaaaatcgagaaacaagtacaacaaatcaagacatggattgatcaagttcgtcgggttgataaatcgatgagaacatcaaacggtatattgtttgttgatgggtctgaaattcaacaagtgcttgtaccaggtttgaagagaatcctcaaaggaatgatggatatgattgctaatcattgtttgttgtcatctgaacagctaatcacagagctctatgatatttcaaagagcctctcaaccaagacatcaacaattgaagaattcacagcccttttccaacggctaaaagaatgcaaggaaaaagccgtttcacttcaaaacagagtagagtatgtctcgtcaatctacgaggttgttcgacactgctatcgccagctaaattctgatgaagaaaatacagaggaaaggctaagcaccgaatataattctttcctatatttcatgcaagatgcaaataattatgtgaatagtttgactcctcagatgcttgaaaatttggagaagaacatttcttccttagagtatgaagcgatggaaatcactgagaaagtcaccagtggtaaatttcttgatgctgacgaaaatccaaaggatatcttaccggaactcaaagagttacatatgagatttgctgagataaaagatcaacttttgaaacttgtcatatgcgaggatattatcaaagatgaacctcacgatttgactgctctctcatcaatgcaagctagaattgttgcgagacacgagctgtggaagtactgtgaagtgactacatacacgatcaaagactggatgcagactccattcacaaagctgcaaacgaagaaagttgtcgagaaggtaacaaaatggagagaagccgtagtcaagctgaaacgagatattccatcagatgatgaagtactttgctcatggattgctaagattgaagattttggaattgatttgcctttattattggaattgtcatctgtgtcattaaaggcccgtcattggaggtggttatttgcaggcttaggccaagtatatgaccaatcatatcattatttagtcattgatttggtcagctttggactaagagatcattcacaacaagtcgtttcaatctgtgacagcgtagcggctgaatatgcattggaagctcatttgaaaaagttgactaaaagatgggaagaagaagaatttagattgatgaaatattttcaagttagccgacagagcagcaaggcgaaagctactataaagaacaagagcacgttgtcacatgatatgtttatattgactggagtcaatgaattgcaatcacatgttgaggataacttggttacgctgcaatcaatgttagtatctcctttccttgcggaaatgagaagcttggctgaaacatggagtgggtatttacatcagttgaaactgatcttggatttatggattagctgtcagcaaaagtggctatatctcgaaaagatctttaatcagtcgacactgaatttgaaactatctcagcaacgaaaagatttcggtgatgttgatgctaaattcagggaacacatggcagcggtgttgaaagacccgaaagtgctttctgttttggaaaagaaaagagccgacaagggttacagagagctgcaaggggacacactgagagaactgtttgttggcgtcatagcaaaagaggaaaaaatcataaaatgcctggacagatatcttgacaacgtcagagcgtcttttccacgactgtactttctaagtgacagtgagatgctggaattacttgcaatttcaagggacccaaaagcgctggtgccgtttgtaagcaaatgcttccctggaattgtgaatttgaagttcatgttgccacaagctctgtcaagtactgtcagaacacagctagatgcttcattgaacgcccacagactagaagttacatgcttttatggccaatgtggagaggaaattaaccttgcaaagacgatccagcctaccgattctgtggaagattggctatgttcgattgaatatgcaatgaaaagtgttttgtggaataagatggctcgatgctttgaagaaagatttcttaacacgccttcaataacaaaacttctgacaagtataggaattcttcaaaaaggcaatgatgctaacacagagatgcgaagacaatcttcggcaagaaaaaggttactgcgagatgaccgtgaaaatgcatactggtttattgtacatccatttcaatgtgtcttagctgcggaagaagtcctatgggctacaaatatggctaaagcattggatccaaaagggttccaaagtatcagtgatgtgagaacattggttgatgatgctataacacaatattcttctgcactacaatcaaatttaattcctgaatctgaagattctttgtcaaagaaagcgattatgctgatccaagctcttctcgttagagcattgtaccaccaagagatgacgaaagatcttgataaacccggtgtcgatgaatcaagttttgaatggctccagtgcttgaaataccagattgagatatctcacgacaaaaggagaagggtatatgatcgacatagaaaagcaaaactcatttacggtgcctcaaacacagcaaagtttggcatgctgcgtacaaatcaaatggaactctcattaccttatggctacgaataccaaggaccaacaacgagactagcgattacaccattgacagatcgagctttactcaatttaatggctgcaatgaaattacattatacaggaggtgtttttgggcctactcaaactggaaagactggaacaatgcatgaactatcgaaggttccaaatctttaaaaaggccggtgtaaaattgagtgacctatttctttgaactgaatgacttcaaagaaactttagatatttctctataattctaccgttggactttactgaaaatttcaatattttcagaattagagtgtttttcttccttttcaagaattcaagaaaaattatcaaaaaaa

Transcript

scaffold155.g2.t2

CTTTGGTACTGCAAAGTATGTTTTTGAGCAAAAGCTTCCATGTTTCGTTGTACTTGTTGAAGAAGTGCTTCATCAATTTATGCTTGCCCTCATCTCGGAAAAATTTGCAAGATTTGTCCATGAAGTTATGAACAAGCAACGTGAAGAGAGAAAAGGGCTATTCTCTGCCGAATTCCAGTTTGACGTAGAAACGAACTTACTGGTATTATCTCCAAGACCGGAATCATTTCTGAGATCCCTACGACTGAGTTTCGAGAATGTTCCTGCTGTCCTGTCTGAAGTATGTGTCCCTATGTTGTTACAAATGAAGTATGGGAGCGAAGACACACTGATGATCAAGGAGATTGATGGCAATAGAAGACTCACTGCTGATGAATTGAGAATTTTGTTGAATTGTGGTGCCAAGGAAGCAAATGAGACATTAAAGCAGAGTACTGACATTGGTGGCAGAAGGCAGTCGTNACGTGAAGAGAGAAAAGGGCTATTCTCTGCCGAATTCCAGTTTGACGTAGAAACGAACTTACTGGTATTATCTCCAAGACCGGAATCATTTCTGAGATCCCTACGACTGAGTTTCGAGAATGTTCCTGCTGTCCTGTCTGAAGTATGTGTCCCTATGTTGTTACAAATGAAGTATGGGAGCGAAGACACACTGATGATCAAGGAGATTGATGGCAATAGAAGACTCACTGCTGATGAATTGAGAATTTTGTTGAATTGTGGTGCCAAGGAAGCAAATGAGACATTAAAGCAGAGTACTGACATTGGTGGCAGAAGGCAGTCGTCAGGCAATGAGCAAATACAGCCATTGTTGCACATGGAGCCAGAGTTTCAAGACAACGATGCATCTGGGGTATCAAGGCAAGAAGCATTGCAAGAAAGACTAGCAGCAAACAAAATGGTGCAAGATTGTACAAACCTAATGAATTCATTGATGACGACAGCTTTTAAAGAAGTAGAAACATTTGCAGAAGAACACAAGTGGATTGCAGCTATACACAAATTTGTGATAACATGGAACAGCAAGACAATGCAGTCATGGAAAGGCCAAACTGCTTCTAAAATCGAGAAACAAGTACAACAAATCAAGACATGGATTGATCAAGTTCGTCGGGTTGATAAATCGATGAGAACATCAAACGGTATATTGTTTGTTGATGGGTCTGAAATTCAACAAGTGCTTGTACCAGGTTTGAAGAGAATCCTCAAAGGAATGATGGATATGATTGCTAATCATTGTTTGTTGTCATCTGAACAGCTAATCACAGAGCTCTATGATATTTCAAAGAGCCTCTCAACCAAGACATCAACAATTGAAGAATTCACAGCCCTTTTCCAACGGCTAAAAGAATGCAAGGAAAAAGCCGTTTCACTTCAAAACAGAGTAGAGTATGTCTCGTCAATCTACGAGGTTGTTCGACACTGCTATCGCCAGCTAAATTCTGATGAAGAAAATACAGAGGAAAGGCTAAGCACCGAATATAATTCTTTCCTATATTTCATGCAAGATGCAAATAATTATGTGAATAGTTTGACTCCTCAGATGCTTGAAAATTTGGAGAAGAACATTTCTTCCTTAGAGTATGAAGCGATGGAAATCACTGAGAAAGTCACCAGTGGTAAATTTCTTGATGCTGACGAAAATCCAAAGGATATCTTACCGGAACTCAAAGAGTTACATATGAGATTTGCTGAGATAAAAGATCAACTTTTGAAACTTGTCATATGCGAGGATATTATCAAAGATGAACCTCACGATTTGACTGCTCTCTCATCAATGCAAGCTAGAATTGTTGCGAGACACGAGCTGTGGAAGTACTGTGAAGTGACTACATACACGATCAAAGACTGGATGCAGACTCCATTCACAAAGCTGCAAACGAAGAAAGTTGTCGAGAAGGTAACAAAATGGAGAGAAGCCGTAGTCAAGCTGAAACGAGATATTCCATCAGATGATGAAGTACTTTGCTCATGGATTGCTAAGATTGAAGATTTTGGAATTGATTTGCCTTTATTATTGGAATTGTCATCTGTGTCATTAAAGGCCCGTCATTGGAGGTGGTTATTTGCAGGCTTAGGCCAAGTATATGACCAATCATATCATTATTTAGTCATTGATTTGGTCAGCTTTGGACTAAGAGATCATTCACAACAAGTCGTTTCAATCTGTGACAGCGTAGCGGCTGAATATGCATTGGAAGCTCATTTGAAAAAGTTGACTAAAAGATGGGAAGAAGAAGAATTTAGATTGATGAAATATTTTCAAGTTAGCCGACAGAGCAGCAAGGCGAAAGCTACTATAAAGAACAAGAGCACGTTGTCACATGATATGTTTATATTGACTGGAGTCAATGAATTGCAATCACATGTTGAGGATAACTTGGTTACGCTGCAATCAATGTTAGTATCTCCTTTCCTTGCGGAAATGAGAAGCTTGGCTGAAACATGGAGTGGGTATTTACATCAGTTGAAACTGATCTTGGATTTATGGATTAGCTGTCAGCAAAAGTGGCTATATCTCGAAAAGATCTTTAATCAGTCGACACTGAATTTGAAACTATCTCAGCAACGAAAAGATTTCGGTGATGTTGATGCTAAATTCAGGGAACACATGGCAGCGGTGTTGAAAGACCCGAAAGTGCTTTCTGTTTTGGAAAAGAAAAGAGCCGACAAGGGTTACAGAGAGCTGCAAGGGGACACACTGAGAGAACTGTTTGTTGGCGTCATAGCAAAAGAGGAAAAAATCATAAAATGCCTGGACAGATATCTTGACAACGTCAGAGCGTCTTTTCCACGACTGTACTTTCTAAGTGACAGTGAGATGCTGGAATTACTTGCAATTTCAAGGGACCCAAAAGCGCTGGTGCCGTTTGTAAGCAAATGCTTCCCTGGAATTGTGAATTTGAAGTTCATGTTGCCACAAGCTCTGTCAAGTACTGTCAGAACACAGCTAGATGCTTCATTGAACGCCCACAGACTAGAAGTTACATGCTTTTATGGCCAATGTGGAGAGGAAATTAACCTTGCAAAGACGATCCAGCCTACCGATTCTGTGGAAGATTGGCTATGTTCGATTGAATATGCAATGAAAAGTGTTTTGTGGAATAAGATGGCTCGATGCTTTGAAGAAAGATTTCTTAACACGCCTTCAATAACAAAACTTCTGACAAGTATAGGAATTCTTCAAAAAGGCAATGATGCTAACACAGAGATGCGAAGACAATCTTCGGCAAGAAAAAGGTTACTGCGAGATGACCGTGAAAATGCATACTGGTTTATTGTACATCCATTTCAATGTGTCTTAGCTGCGGAAGAAGTCCTATGGGCTACAAATATGGCTAAAGCATTGGATCCAAAAGGGTTCCAAAGTATCAGTGATGTGAGAACATTGGTTGATGATGCTATAACACAATATTCTTCTGCACTACAATCAAATTTAATTCCTGAATCTGAAGATTCTTTGTCAAAGAAAGCGATTATGCTGATCCAAGCTCTTCTCGTTAGAGCATTGTACCACCAAGAGATGACGAAAGATCTTGATAAACCCGGTGTCGATGAATCAAGTTTTGAATGGCTCCAGTGCTTGAAATACCAGATTGAGATATCTCACGACAAAAGGAGAAGGGTATATGATCGACATAGAAAAGCAAAACTCATTTACGGTGCCTCAAACACAGCAAAGTTTGGCATGCTGCGTACAAATCAAATGGAACTCTCATTACCTTATGGCTACGAATACCAAGGACCAACAACGAGACTAGCGATTACACCATTGACAGATCGAGCTTTACTCAATTTAATGGCTGCAATGAAATTACATTATACAGGAGGTGTTTTTGGGCCTACTCAAACTGGAAAGACTGGAACAATGCATGAACTATCGAAGgttccaaatctttaaaaaggccggtgtaaaattgagtgacctatttctttgaactgaatgacttcaaagaaactttagatatttctctataattctaccgttggactttactgaaaatttcaatattttcagaattagagtgtttttcttccttttcaagaattcaagaaaaattatcaaaaaaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20683 all species →	DUF6819	Domain of unknown function (DUF6819)	Domain	Interproscan
PF08393 all species →	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan
PF12774 all species →	AAA_6	Hydrolytic ATP binding site of dynein motor region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049208 all species →	Domain	Domain of unknown function DUF6819	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR013602 all species →	Domain	Dynein heavy chain, linker	Interproscan
IPR026983 all species →	Family	Dynein heavy chain	Interproscan
IPR042222 all species →	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR035699 all species →	Domain	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Interproscan
IPR042228 all species →	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45703 all species →	DYNEIN HEAVY CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0030286 all species →	Cellular Component	dynein complex	Interproscan
GO:0045505 all species →	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold155.g2.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.