Detailed information of scaffold159.g49.t3 in Morbakka virulenta

Genomic Location: scaffold159:1624465...1680820
NR annotation: XP_020600778.1, pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q17R09Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos taurus OX=9913 GN=DHX38 PE=2 SV=1
Q92620Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo sapiens OX=9606 GN=DHX38 PE=1 SV=2
P34498Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 OS=Caenorhabditis elegans OX=6239 GN=mog-1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF13401AAA_22AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR049945DomainORC1/DEAH AAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0034458Molecular Function3'-5' RNA helicase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12815DHX38, PRP16; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16EC:5.6.2.6
Spliceosomeko03041deepkoala

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