Gene detail

Detailed information of scaffold163.g28.t1 in Morbakka virulenta

Genomic Location: scaffold163:903228...957945
NR annotation: KAI0223262.1, hypothetical protein LSAT2_025533, partial [Lamellibrachia satsuma]

Gene Structure

More details in Jbrowse

Sequence

CDS

scaffold163.g28.t1

ATGAACAACTTAAACGTATTAGTCACTAAAAATGAACAAATTGATTATCTCTTTCAACCTGCAAGCCATTCTCAAGCAGGTGgtgcattcgacgtacatagaataatttcaaagttaccacatcccaaaggtgattggacactacctggatatcaatatttaggaccgatgaatcctctagaagatcaacttgatgaaaatgataatccaaaacctaatcatcttcctaaaaatgaactagataatattgctcgtcgtcatgatatttgttatagagataataataataaacagggtaaaaaagtatgtgatgaagtgatgttagactcaatggataaaatgaaaccaaaaaattttagagaaaaagttgatagaaaattagttcaaggagtaattgtaagtgaggacattaaagccgatgtggtggaggtgaaaagagtaagtggaagagctatgagtgttaagattgccacagaggaaggaatgctcaacgtggtaagcgcatatgctccccaggtaggatgctcagactatgagaaggaggctttctggacagaatttgaggagactgtgagagATTTAACAGTGTCAAATATATCGGATTTAAATGGTGTAACGTTGAAAGGAACTATGAATTTAGATGCGGCGGGGTGGATAACAGCTGTACAAGACCCTTTAAATAATACAGATGTAGCTAATAAAAAATATGTTGATGATCTAGTGGTAGGAGTAAAAGTAGATCCTAATGGACATTTAACATCATCGTCAGATGGTTTAAGAATATCCCCTAAATACATTGACACAGGTGAAATAAAAACACCTTTAGCAAATATTAATAATATCATATCAGATGTTGTAACAGCTTTAGGAGTTATAATTGAAGCGAATTCAACAAATGAAATGAAAATAGCTAATCGTCAAATTACAAATGTTATAGCACCTACACAAGATGGAGATGTTGCAAATAAGCAGTTGGAAAAATTAAAAGAAATATCTGATAAACCTGATGAAAGAATATTACAAACTTTGAGAGTTATAGCAGATAAACCAGATATTAATTATGATGAACTAACTAGAGCATTCATTAATGCTTCAAGAGCTACTGAACATGAGAGAAGACTTCCTGAAGCTATAGAAGCACCTCTACCTGAAAGTAGACCAGGTTCTCCAATAATAGAAGAACCTGAAATAGTAGAAGAAAAACCTGAAAGACCTGGTTTTTTACCTAAACATTTATCAACAAGAATTGGTGACAATTTGATTTATATATCAATTAAATCAGATGATGAATTAGAAAAAATGTCTATCGAAGATATTGTAAAACATATACGTGATGTAGAAAATAATCATAATATATTGAAAAGAATTTTTAACAACGATTATTCAGTTAGAAATATGAGGAGATATAAATCATATGATAAAAATCTGAAAGTGTTTGAAGATACTGTTGCTTATTCAACATATTTAAGAAGACGCAAGAGAAGTGAAAAAAACAAATACGATGATCATTTACCTAGCTGCTACAGACAGTGGTTTAGATGTTGCAGCCAGCTTGCAAATGCTGCCACAACGGAAGCAAAGGTTGCAAATGGTGCCACAGTGGAAGCAAAGGTTGAAAATGCCCTTTGTGATACATTACATTACTGTTTTGATTTATCTTCAGATAACTCCGGTGAATTGCAGGAAAATGAAAGGAGTACTAATATCAAAACAGTTTCATCGCCTTACATAATCAAGAATAATTTGACTGGCCAACAACTTATAGCTGTTACAGGAAATCAGACGAAAGGCATCTCTTTTCAACCTCTCTTCACGTACCTGGAAGAATGTGAGAAATCTTGTACCAATTTACATCAACAGTCGATGGAAAAAACTTTTTTCCAATCAAGCAATATTGCAGATCAATCCAGCGAGGGCCTTCCAACCATATCACCATCGTTGTCACCACAGGATCTGCCACCGAGTTATGAAACAGCTGCACGAAATAACACAGAAACTTTTGCTGCACCACCAAATTACCAGACAGTTGTATCAGTGGACATGCATATTCAGTCCGAACCTCCCAGTTATGAGACACTTGCAGAACAGGATACAGAATCATCATTGTTTTAA

Transcript

scaffold163.g28.t1

TTAAAAGTAGTAGTTGACATTTTATGATATGAGCATTACAGTGATTAGGAAGTTTTTATGGCGTGGCACGCTGTCAAAGAAATTCAAATGCTTTATTACAAGCCAATTTTAATTGCCCTGTTAATAAAGTAGTGTCCAATAGCAATTTAGTTCGAGAGGTCTGCAAATAGATTCGCATTGACGTGATAAGAAGTTTGACAATGGTATTCGTTGTTAACGTATGGAAACAAGGTCGGGAGTAGTACTTGCACTTTTTAATTTCTTTTGTCACATATTTTTTTAAAGCGTGGAAAGCAAGTGACTTTTAAACTGGAGTTTTAATATTGATTGTAAAAGTTTTAATTGTGTTTTTATTATTTACCGGTAATAGTTGTATGTAGACAACCGCTTTTGTTTTAGATCGAAGAGTATGACGTCACAGTCACTGTGGACCAATTTCCTTGTACAATAAATAGTAGTAATCAAAGTAGGACTTGATTAGCAAACTTGCTAAATCTAATATTTATAAAAATGAACAACTTAAACGTATTAGTCACTAAAAATGAACAAATTGATTATCTCTTTCAACCTGCAAGCCATTCTCAAGCAGGTGgtgcattcgacgtacatagaataatttcaaagttaccacatcccaaaggtgattggacactacctggatatcaatatttaggaccgatgaatcctctagaagatcaacttgatgaaaatgataatccaaaacctaatcatcttcctaaaaatgaactagataatattgctcgtcgtcatgatatttgttatagagataataataataaacagggtaaaaaagtatgtgatgaagtgatgttagactcaatggataaaatgaaaccaaaaaattttagagaaaaagttgatagaaaattagttcaaggagtaattgtaagtgaggacattaaagccgatgtggtggaggtgaaaagagtaagtggaagagctatgagtgttaagattgccacagaggaaggaatgctcaacgtggtaagcgcatatgctccccaggtaggatgctcagactatgagaaggaggctttctggacagaatttgaggagactgtgagagATTTAACAGTGTCAAATATATCGGATTTAAATGGTGTAACGTTGAAAGGAACTATGAATTTAGATGCGGCGGGGTGGATAACAGCTGTACAAGACCCTTTAAATAATACAGATGTAGCTAATAAAAAATATGTTGATGATCTAGTGGTAGGAGTAAAAGTAGATCCTAATGGACATTTAACATCATCGTCAGATGGTTTAAGAATATCCCCTAAATACATTGACACAGGTGAAATAAAAACACCTTTAGCAAATATTAATAATATCATATCAGATGTTGTAACAGCTTTAGGAGTTATAATTGAAGCGAATTCAACAAATGAAATGAAAATAGCTAATCGTCAAATTACAAATGTTATAGCACCTACACAAGATGGAGATGTTGCAAATAAGCAGTTGGAAAAATTAAAAGAAATATCTGATAAACCTGATGAAAGAATATTACAAACTTTGAGAGTTATAGCAGATAAACCAGATATTAATTATGATGAACTAACTAGAGCATTCATTAATGCTTCAAGAGCTACTGAACATGAGAGAAGACTTCCTGAAGCTATAGAAGCACCTCTACCTGAAAGTAGACCAGGTTCTCCAATAATAGAAGAACCTGAAATAGTAGAAGAAAAACCTGAAAGACCTGGTTTTTTACCTAAACATTTATCAACAAGAATTGGTGACAATTTGATTTATATATCAATTAAATCAGATGATGAATTAGAAAAAATGTCTATCGAAGATATTGTAAAACATATACGTGATGTAGAAAATAATCATAATATATTGAAAAGAATTTTTAACAACGATTATTCAGTTAGAAATATGAGGAGATATAAATCATATGATAAAAATCTGAAAGTGTTTGAAGATACTGTTGCTTATTCAACATATTTAAGAAGACGCAAGAGAAGTGAAAAAAACAAATACGATGATCATTTACCTAGCTGCTACAGACAGTGGTTTAGATGTTGCAGCCAGCTTGCAAATGCTGCCACAACGGAAGCAAAGGTTGCAAATGGTGCCACAGTGGAAGCAAAGGTTGAAAATGCCCTTTGTGATACATTACATTACTGTTTTGATTTATCTTCAGATAACTCCGGTGAATTGCAGGAAAATGAAAGGAGTACTAATATCAAAACAGTTTCATCGCCTTACATAATCAAGAATAATTTGACTGGCCAACAACTTATAGCTGTTACAGGAAATCAGACGAAAGGCATCTCTTTTCAACCTCTCTTCACGTACCTGGAAGAATGTGAGAAATCTTGTACCAATTTACATCAACAGTCGATGGAAAAAACTTTTTTCCAATCAAGCAATATTGCAGATCAATCCAGCGAGGGCCTTCCAACCATATCACCATCGTTGTCACCACAGGATCTGCCACCGAGTTATGAAACAGCTGCACGAAATAACACAGAAACTTTTGCTGCACCACCAAATTACCAGACAGTTGTATCAGTGGACATGCATATTCAGTCCGAACCTCCCAGTTATGAGACACTTGCAGAACAGGATACAGAATCATCATTGTTTTAAGTGTAATTAAAGACAGGAAGGAAAGAGGAGAACTGCTGTATAGCCTCAAAAAAACTTTATCATGGCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08398	Phospholip_A2_4	Phospholipase A2-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036444	Homologous_superfamily	Phospholipase A2 domain superfamily	Interproscan
IPR013607	Domain	Phospholipase A2-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0004623	Molecular Function	phospholipase A2 activity	Interproscan
GO:0006644	Biological Process	phospholipid metabolic process	Interproscan
GO:0050482	Biological Process	arachidonate secretion	Interproscan
GO:0005198	Molecular Function	structural molecule activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04683	TFDP1; transcription factor Dp-1	-	Chromosome and associated proteins	ko03036	deepkoala