Gene detail

Detailed information of scaffold164.g30.t1 in Morbakka virulenta

Genomic Location: scaffold164:1563266...1665749
NR annotation: XP_020914431.1, insulin gene enhancer protein isl-1 isoform X4 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold164.g30.t1

CGATCTAAGATCACTCAATGCAGGTAGCAGATGAAGGTTGTGTTTTTGATGAGCTAATGTAAGCCTCAAAGAATCACGTGATTTGTCTAGAAATGGTGACAAACCAATGAACGCTTCGTTTAATGTAGCTGAAATTCACTGTAGGAAGACCATTAACGTCACCTATCATATTTGAAGTTGCAAGCATGTATTTATATAAACACAGCAATATTACCGAATCTTACATACTGTTATTTCTGAACACTGCTAGCAAAGAGGGGGAGAGAAAAAGGAAAGGAATCAAATTGCATATCTGTTCATGAAAAAAATTCAAGAGACGTTAGACTTCCCTTAATTTACATAAAACAATTCAAACTATACTGCACAATTTCTAGATATTCGGGGGAAACAGACTGTCCCGGAACATCACAGGAAACTATTGAAGGCGCTGTAGAGATGCCGATTTGCTGTGGATGTGGGGGAGACATCACAGATCGATATTTATTAAAAGTGACACCTGATTTGGAGTGGCATACTGACTGCTTAAAATGTTCTGTATGTGGTACATCTCTACACGACTGTAAAACGTGTTTTATTCGAGACGAAAAGGCGTACTGTAAAGCAGACTACGAAAGACTCTTCGTTGCACGATGTCATGGGTGTGACAAAATCCTAGACAAAAACATATTAGTCATGAGAGCTAAGAAGAACACCTATCACATGGAGTGTTTTCGTTGTATTGCCTGTAAACGTCGACTCACATCAGGTGATGTGTTTGCATTGACAAGTGACGGATTGTTATGTGAAGAGGATCACAATCAAAGTGATTGTTCTTTACATGAAGATGATGAGGAGGACTCCAAAGACACAACCAAAGAAAATTGTATTTTAACTGAATCACGGAGTGAAAAACTAGCCAACAGTGTAACGCTGAAGACAAATAAAGAGCTTAAAGTCAATGGAAGTTTTTATTTAAAGTCTAAAAAGGACAAGCCAACTCGGGTTCGAACTGTACTGAACGAAAAGCAGCTGAGTACATTAAAAGCTTGCTACAACGCAAATCCTAGACCAGATGCAAGTATGAAAGAACAACTTGTTGAACTAACAGGTCTCAGCCCGCGTGTTATAAGGGTTTGGTTTCAAAACAAACGATGCAAAGATAAGAAAAAATCTCTTATTATGAAAGGCTCAGAAGTTCCCGATCACGGACAAAGCTATAGTCTTCACTCTTCGCCATTAAGTGATGAGCTGTCAACAAATGGTTTTCCTTCATTGTCAAATTCCCTTTCTTTAGTCGCCCTTGCATCACAACAGAATATGCCTATCAGTCAACCAATGCATTTTCCTGTCCCATCTAGTAACGAACAACAAGCAATGGATACTTCTTCGTACAGAACAAATTTATCGTTGAGAGAGTATAATCAATGGCGATCGCTATCTGATTACTCATTTCCTGTAACTAACACTCAAGGAAATACCCCCGGGGCCTATCAACAGTTGGCCCACTTTCCGAGTGACCCAGGAATTCGACTTGAACCAGGACTTGCCCGTATTTAACTACAGCTATGAAGCTACAATGCTTTTAGTAAGCATTGAATTTGGTAAAGCATTATTTCGTCTAAACATGATTCGTTTTCATTAGAATAACAGTGGCAGTAGAAGTAGGACATAGTTACAGATTATCTATTTGATTTTATTTAGGATGAAATATTTTTTGGTAGTTTTAAGGCATCCTGTTTTATTTTCTTTTACGATAAACAAACAAAGATCCATACCATTTCTTATTCGGTAAAGGTAAGGATGAAATAATGAAAAGTACATCGGTCATATCATTACCAAGGGTAGTTCCTCTCTTTACTTTGAATATCGTAAAACCAATTGAAAATATATTCATGTGCCTAAAATAAACGTTGATTTAAACTCTTTCTATCCATCAGGTGACATCGCCAGTCGAGTTAACCATCATTGGGTTTTAAGGATTCCCCTTTTTAGCAAAGGTGAATTGCTATATTGTACATGGAATCAAAccttgaaaatgttgaactttatggactcagaggaagccatggatgaaagagctttatcatgtcatgagtcgtaagcattttctgagctacgtatcTCTCGAAACATGATAAAGCAGAATAAAGCTCTTACATCTATGATCAAACCTTGTTCTTTTTTCTCTTACTACTCTCAATAATTCTTATCTGAAGGATTTCTATCATTTATTTTCTCCTAATAATGTAACAAAGAGGAAACCTTCATTTTATTTGTAAATTATAAGCTTAAAACTCTATTTGTCATTAAATATCATTTTAATTTGTACCTCTCATGTATAAATGCTACTGACTTCATTAAGCCGCTCATTTTGCTTCATCTGAGTGAGTACTCCAACGCGGTAGATCTATTATTGTTTTTTTAACTCTCTGTCTTATTACTAAGCCTGTACATATATTACTATTGTCTGTCAGTCTGTCAGTCTCTCTGTCTTATTACTAAGCCTGCAGATATATTGCTATTGTCTGTCTGTCAGTCCCTCTGTCCCTCTGTCGTATTACTAAGCCTGCAAATATGTTGGTATTGTCTGTCTGTCTGTCAATCCCTCTGTCTCTCTGTCGTATTACTAAGCCTGCAGATATATTACTATtgtctgtctgtctgtctgtctgtctgtcAATCCCTCTGTCTCTCTGTCGTATTAGTAAGCCTGCAGATATATTACTATTGTCTGTCAGTCAGTCTGTCAGTCCCTCTGTCTCTCTGTCGTATTACTAAGCCTGCAGACATATTACTATTGTCTGTCAGTCAGTCTGTCAGTCCCTCTGTCTCTCTGTCGTATTACTAAGCCTGCAGATATATTGCTATtgtctgtctgtctgtctgtcagtctctctgtctctctgtcGTATTACTAAGCCTGCAGATATATTGCTATTGCTTTTATATTGTCCATAAATGTTATTTTGAAAACGGGTGAACAGCCATTATGATATTTTATCACTTTACATAAAACTAGGCATGTTTCTAAAATTAACATCGTATATACTATGTATGTACGGTAATTGTACTGAGATAGAACTTTTATTTTAGGATTCGTGACAGGTATGTTTTCTTTGGATATTGTTTCCTTTCTTCAGTTAACGCTGTAAATTTTTGCATAGCAAGGCACACAATTAGCAAAACATTCACTTCTTGCAAATATTTAATACTTTCTCACAATAGCATGCTACTCCTATATTACCACAATCAAATAATCTATATTTAATTAAAAGTTGGAAATATCTTGATATTTGGTTTGTAAATGGTCAAACTAAAATAAGATGACAAACAACGAAACCAATACAATAGAATTACTAACATGTTCACTCGATTCAATAATAAATTACAATAACTCAAAATTAAACTTTAGTTTGAACCTAAAGTCACTAATATCAACGTATCTGTTTCATAATATTTAGTTAAGAGTAAATTTCATTTGGGCAAAAACTGAGAAACTCTTTCTGAAACAGAGGAAGTTTGAATACAAATTTCAGGGGCAAATAGAGTGAGCGACACAGTAGCATAAGATATAAACGTTACATAAGGTACCATATCTGTTCCCCCATGCCTTCCCAGTGTTGGCATTGTCATCGTCTAGAGAGCAAATATAGTTTGAAGAGCAGGCATAAAAGTCATGTTCTACTTAATCAAGAAAAGTATTGTTGTAAATTGCAAGAGGTAAAGAGTTCACTAATTAATACTGTTAAAAAACAAAGAAACTAGAAGATA

Protein

Uniprot

Uniprot term	Description
P53405	Insulin gene enhancer protein isl-1 OS=Danio rerio OX=7955 GN=isl1 PE=2 SV=1
P53408	Insulin gene enhancer protein ISL-2A OS=Oncorhynchus tshawytscha OX=74940 GN=isl2a PE=2 SV=1
P50212	Insulin gene enhancer protein ISL-2B (Fragment) OS=Oncorhynchus tshawytscha OX=74940 GN=isl2b PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00412	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR047169	Family	Insulin gene enhancer protein ISL-1/2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24204	INSULIN GENE ENHANCER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0007409	Biological Process	axonogenesis	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0048665	Biological Process	neuron fate specification	Interproscan