Genomic Location: scaffold166:144103...181015
NR annotation: CAF2092059.1, unnamed protein product [Rotaria magnacalcarata]
| CDS | ||||
| scaffold166.g7.t2 | ||||
| Transcript |
| scaffold166.g7.t2 |
| Protein |
| scaffold166.g7.t2 |
| Uniprot term | Description |
|---|---|
| Q1L8P7 | Thrombospondin-3b OS=Danio rerio OX=7955 GN=thbs3b PE=3 SV=1 |
| P35445 | Cartilage oligomeric matrix protein OS=Bos taurus OX=9913 GN=COMP PE=1 SV=2 |
| P49747 | Cartilage oligomeric matrix protein OS=Homo sapiens OX=9606 GN=COMP PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03372 | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | Domain | Interproscan |
| PF12947 | EGF_3 | EGF domain | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF05735 | TSP_C | Thrombospondin C-terminal region | Family | Interproscan |
| PF13385 | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| PF02412 | TSP_3 | Thrombospondin type 3 repeat | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR017897 | Repeat | Thrombospondin, type 3 repeat | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR028974 | Homologous_superfamily | TSP type-3 repeat | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR024731 | Domain | EGF domain | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR008859 | Domain | Thrombospondin, C-terminal | Interproscan |
| IPR003367 | Repeat | Thrombospondin, type 3-like repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10199 | THROMBOSPONDIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0005576 | Cellular Component | extracellular region | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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