Gene detail

Detailed information of scaffold1685.g2.t3 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold1685:11466...59708
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold1685.g2.t3

cctttaactctcctacgaaagacaagaattatttaagatcctgctggccgaagaccgcctcaaaatcaagatcaaagacaagagatgcttgggtgccgtctggcctaaattcaccagatcagcaaggcgtctgtaacccttgaaacacctgatcctctcaaactttgtctttgtatcaatatgggcgataacctcgtggattttggaataacagatgaagcttcactgttggaagcactcaaagaacgtaacagaaatggcgagagctttacttatcttggagatgtacttgttgcacttaatgcattcaaaggtgtcccaagagaggatgcaggaaagacaactgatcctaaatcaccacatcccttgacagttgcatcagccatgtatgaagccatctgtaagaaatcagagagccaatgttgtgtaattgctggcgaaacatgctctgggaagactgagattggaagaatcgttctcagtggattgttgaaatttctgaaaacagagaaaccagatatccagtacaaaattacaatggcaaatataatccttgatgcttttggtcatgcaagaacaccgctaagtagaaatgcaacaaggtttggaaaattcctgcagtttttcttcaatcctgatggcactgttatatcagctgccttttctgaatatttgctggaaaagacaagggttatacgacagagaaaggaaggacgaaatttccacatattctactacttatttcatgggatgtcacaagaagaactagatcaactctatcttggtaccatggaaaaccacaggtaccttggttttggtgctacaatcgctgaaacacaagcggacgaaaatctcttgaaaagaatgtacttgggtgtatgcaaatcaatgaagaatattggatttacgatagaggaaattgctgattgctttcaagttctatctggaattcttaacgttggaaatatgaaatttgcaagcaaagatgaaagtgctgacttgatggttagcacgatagattcaattgaaaatgctgcgatcctactaggtgtagaaaaagagaaattcgagaaagcactcacgacattgacagcaactgttgatggtgaaacaatgacggctacaaaaagtatatctaaagccagtataggaagagatcttctttcaaaagaattatacggtcgactgttcagttggattgtgttcaaaatcaatagtttcgtgcagtgccttgatcacaagaaaaaaactgccacagcaccgtctcttggtttactggacatttttggatttgaagagtttgagacaaatacatttgagcagctgtgtgtcaattctgcaaatgaacaactgaattttttctttgttcaacatgtgtttgcgtgggaaaaggaaaaaggcatttcaagatccttctcaaaattcgataaatgcaaagaccaaagacaatggctacgaatggcaagttgtacgtccccggagaacaacgttatcaatggaacaaaagtcctggacagaacgcccanaggaattgacggcatggctctggattatccagataacaagaatatcatcaacctcctccttgaaaaatcaacaggattattcgctttgctagatgaagaaagcagatatccaaatgccgatgataatactttggtttctaaattcaatgcgaactgtgttgatcatgataattattcaaatgttagcagtaaaagaccaatgtttgcgatcattcattttaatggcaaggttcattatttcgtcgatggctttttgcaaaagaacagagcctctcttagcaatcacattatcgattgcctcaaagattctagtaacagtgttgtcagttcgttattccaagggacgataacaaaaactggatcattcatcgttgacccgtcaaaagatggatgcaaagactcaaagcaaacgccaaggaaaaggaaaactagcgagactagtgctacagctgcgcgacgaaagcaaaaacctaatttcactactggaacacagttcaggaattcactggttgagttgatggagaagatcctgcaaagccagccacattttatcagatgcattaagtcaaataatagcgaagaagcaaacaaatttgatgatcaagttatgctcaaacagattcaaggattctgtttacatgaaacattgagggttcgagagcatgggtatccgatatttttgaaattgaaacaggagcaagaattgaacctccatctcagcagggtgcataaagacgttgttacggttcagaaattgttccgtggaaagttggccagaatcgattgcgacttcctgatgacaaacagaaaacacgaagagagaaccatcggaaatttcctgatgtcggtttccacaaagccagccaaattacatgatgcattacttgccatgagcagacaggatgttaaacgccatggcaaagaaaatgaggaatctaggcgaaaacaaagagagacccaaaagaagaaagctgcacaagcactggcagaatcctcatccgcaaactctagacgaaacagaagtaaagatgattttcatgtcggaggcaagcagaacggtagtctgaagccgggtggtcgaccaactgtttacgaaggtgaactgccactgatgcgagacttcacgagagggagactgaaagcatggtgtcgtgtggattgttatgaaagacagtttcatgttgcgtccttctttctgcatcaaccagtcataacgattgatggctcgcatattgtcgaccagtctgcaaagctcaagcataatcaatcaagatgtcaagccatgttttcgggttcctttaaagatgactttgacgttgtgcagagagaatcgaccgtatggtttggcgcttacatggttacttcaattttcatttcacttttcactataccgactattggcccactttcagatgtctttggccggattaagataatgtatctaacgccgataagtctgtttattagaaacatggtcattttgtgcatcctttactccggagtacgttatgaaacatgggtattaattctactggcgccaatacctgctctcgctggaagtggtaacggattttatgttgtagcaggggcctacattacagatattacaacggttgaccagcggacaatgcgctttaatctactagatgctgcagcaatgctaggatgcttcatatcaacactcaccagtggactaataataaaacgatttggatacaagggcatatatgtagcgagccttggtttgctgttaatggcaattctcgacttgatctttcttgttaaaccagctcttcgcaatgattccgatggtgatcagaaaaacgaagtggatgctgacattctggagaaccgaaaacatgaaggacagaattctcgctcagtcgaacaaaataacaacgaagacacagatgcagaaaaggatggtttccacgaggaagcaaaaaacgttctttcgtcagcgccagtgtacatcatcatgaactctgatattgcaattggagagcaaggagaacccaatgcttcgatggctaaccaaggcggtggcgaaaatctcgaatctatcattgtgcaggaaaatggaagggaagatgctcgatctggagaggagataatgatggtagaaggcactatctgcaatccagaaacagatcccgaaagcattgcaaggaagcaaaatatacaccctgaaaaagagatagaactaagtcctgggaaaaaagttgaagaattgccacctgtcaccaaagtagacaaagagaatgatcttggcacgattccagaatgccatgaaaataaagatatcgaagcatcacctcaacaaattaaagatttgaagacaggactcgaggaaaagattaagcttcgagacgtattaagacatgcaaacccaattcgaaattttaagttgttagtgcagtgtttgaaggaaaatggaaacgtgaagttagcttatgttctattcttactgatggcgtttgggacatttgcgtacactacagagatgtttgtaatggtgaattacttgaagaaccgtccattctttcttgatgctagaaatatcggctttttattggcttctgacagtggaattataagcatcgttggccttggattcttcagtttcctcatgacgaaagtgttcaaactgaatgattacgtcatcgtcgcaataacatttgctacactgttgctttattacgttcttcttggcattgcaaattcgttgttgatgctgtatctcattcaagttgtacatgctgccggtgccttagtgatccccactttgcgatccatgctttccaaacttgttccaccgtcttccatcggggttttgatgggagcccttctaatggtagaaacatttgcagagctaattgcatcaatagtgggtccttttgcctatgccggattggtggcgtcttatcccggtgcagtgttctttgtggttgcagggatagcactcttggcaacgatcatatctgtgggaatgctttgcaagaggcgtaatattgaggaaagacatgccgttagtttggaaggagctaccaataacattgcttatgttgtctgaactattttatctagatctgatatgttgaactcccggggatgtgggggtaacttccatatttaaagcaacgggcacgtgccgcccataaggatgtggtttgagcctcgaaaatccctgaatacactcctttataagaa

Transcript

scaffold1685.g2.t3

CCTTTAACTCTCCTACGAAAGACAAGAATTATTTAAGATCCTGCTGGCCGAAGACCGCCTCAAAATCAAGATCAAAGACAAGAGATGCTTGGGTGCCGTCTGGCCTAAATTCACCAGATCAGCAAGGCGTCTGTAACCCTTGAAACACCTGATCCTCTCAAACTTTGTCTTTGTATCAATATGGGCGATAACCTCGTGGATTTTGGAATAACAGATGAAGCTTCACTGTTGGAAGCACTCAAAGAACGTAACAGAAATGGCGAGAGCTTTACTTATCTTGGAGATGTACTTGTTGCACTTAATGCATTCAAAGGTGTCCCAAGAGAGGATGCAGGAAAGACAACTGATCCTAAATCACCACATCCCTTGACAGTTGCATCAGCCATGTATGAAGCCATCTGTAAGAAATCAGAGAGCCAATGTTGTGTAATTGCTGGCGAAACATGCTCTGGGAAGACTGAGATTGGAAGAATCGTTCTCAGTGGATTGTTGAAATTTCTGAAAACAGAGAAACCAGATATCCAGTACAAAATTACAATGGCAAATATAATCCTTGATGCTTTTGGTCATGCAAGAACACCGCTAAGTAGAAATGCAACAAGGTTTGGAAAATTCCTGCAGTTTTTCTTCAATCCTGATGGCACTGTTATATCAGCTGCCTTTTCTGAATATTTGCTGGAAAAGACAAGGGTTATACGACAGAGAAAGGAAGGACGAAATTTCCACATATTCTACTACTTATTTCATGGGATGTCACAAGAAGAACTAGATCAACTCTATCTTGGTACCATGGAAAACCACAGGTACCTTGGTTTTGGTGCTACAATCGCTGAAACACAAGCGGACGAAAATCTCTTGAAAAGAATGTACTTGGGTGTATGCAAATCAATGAAGAATATTGGATTTACGATAGAGGAAATTGCTGATTGCTTTCAAGTTCTATCTGGAATTCTTAACGTTGGAAATATGAAATTTGCAAGCAAAGATGAAAGTGCTGACTTGATGGTTAGCACGATAGATTCAATTGAAAATGCTGCGATCCTACTAGGTGTAGAAAAAGAGAAATTCGAGAAAGCACTCACGACATTGACAGCAACTGTTGATGGTGAAACAATGACGGCTACAAAAAGTATATCTAAAGCCAGTATAGGAAGAGATCTTCTTTCAAAAGAATTATACGGTCGACTGTTCAGTTGGATTGTGTTCAAAATCAATAGTTTCGTGCAGTGCCTTGATCACAAGAAAAAAACTGCCACAGCACCGTCTCTTGGTTTACTGGACATTTTTGGATTTGAAGAGTTTGAGACAAATACATTTGAGCAGCTGTGTGTCAATTCTGCAAATGAACAACTGAATTTTTTCTTTGTTCAACATGTGTTTGCGTGGGAAAAGGAAAAAGGCATTTCAAGATCCTTCTCAAAATTCGATAAATGCAAAGACCAAAGACAATGGCTACGAATGGCAAGTTGTACGTCCCCGGAGAACAACGTTATCAATGGAACAAAAGTCCTGGACAGAACGCCCANAGGAATTGACGGCATGGCTCTGGATTATCCAGATAACAAGAATATCATCAACCTCCTCCTTGAAAAATCAACAGGATTATTCGCTTTGCTAGATGAAGAAAGCAGATATCCAAATGCCGATGATAATACTTTGGTTTCTAAATTCAATGCGAACTGTGTTGATCATGATAATTATTCAAATGTTAGCAGTAAAAGACCAATGTTTGCGATCATTCATTTTAATGGCAAGGTTCATTATTTCGTCGATGGCTTTTTGCAAAAGAACAGAGCCTCTCTTAGCAATCACATTATCGATTGCCTCAAAGATTCTAGTAACAGTGTTGTCAGTTCGTTATTCCAAGGGACGATAACAAAAACTGGATCATTCATCGTTGACCCGTCAAAAGATGGATGCAAAGACTCAAAGCAAACGCCAAGGAAAAGGAAAACTAGCGAGACTAGTGCTACAGCTGCGCGACGAAAGCAAAAACCTAATTTCACTACTGGAACACAGTTCAGGAATTCACTGGTTGAGTTGATGGAGAAGATCCTGCAAAGCCAGCCACATTTTATCAGATGCATTAAGTCAAATAATAGCGAAGAAGCAAACAAATTTGATGATCAAGTTATGCTCAAACAGATTCAAGGATTCTGTTTACATGAAACATTGAGGGTTCGAGAGCATGGGTATCCGATATTTTTGAAATTGAAACAGGAGCAAGAATTGAACCTCCATCTCAGCAGGGTGCATAAAGACGTTGTTACGGTTCAGAAATTGTTCCGTGGAAAGTTGGCCAGAATCGATTGCGACTTCCTGATGACAAACAGAAAACACGAAGAGAGAACCATCGGAAATTTCCTGATGTCGGTTTCCACAAAGCCAGCCAAATTACATGATGCATTACTTGCCATGAGCAGACAGGATGTTAAACGCCATGGCAAAGAAAATGAGGAATCTAGGCGAAAACAAAGAGAGACCCAAAAGAAGAAAGCTGCACAAGCACTGGCAGAATCCTCATCCGCAAACTCTAGACGAAACAGAAGTAAAGATGATTTTCATGTCGGAGGCAAGCAGAACGGTAGTCTGAAGCCGGGTGGTCGACCAACTGTTTACGAAGGTGAACTGCCACTGATGCGAGACTTCACGAGAGGGAGACTGAAAGCATGGTGTCGTGTGGATTGTTATGAAAGACAGTTTCATGTTGCGTCCTTCTTTCTGCATCAACCAGTCATAACGATTGATGGCTCGCATATTGTCGACCAGTCTGCAAAGCTCAAGCATAATCAATCAAGATGTCAAGCCATGTTTTCGGGTTCCTTTAAAGATGACTTTGACGTTGTGCAGAGAGAATCGACCGTATGGTTTGGCGCTTACATGGTTACTTCAATTTTCATTTCACTTTTCACTATACCGACTATTGGCCCACTTTCAGATGTCTTTGGCCGGATTAAGATAATGTATCTAACGCCGATAAGTCTGTTTATTAGAAACATGGTCATTTTGTGCATCCTTTACTCCGGAGTACGTTATGAAACATGGGTATTAATTCTACTGGCGCCAATACCTGCTCTCGCTGGAAGTGGTAACGGATTTTATGTTGTAGCAGGGGCCTACATTACAGATATTACAACGGTTGACCAGCGGACAATGCGCTTTAATCTACTAGATGCTGCAGCAATGCTAGGATGCTTCATATCAACACTCACCAGTGGACTAATAATAAAACGATTTGGATACAAGGGCATATATGTAGCGAGCCTTGGTTTGCTGTTAATGGCAATTCTCGACTTGATCTTTCTTGTTAAACCAGCTCTTCGCAATGATTCCGATGGTGATCAGAAAAACGAAGTGGATGCTGACATTCTGGAGAACCGAAAACATGAAGGACAGAATTCTCGCTCAGTCGAACAAAATAACAACGAAGACACAGATGCAGAAAAGGATGGTTTCCACGAGGAAGCAAAAAACGTTCTTTCGTCAGCGCCAGTGTACATCATCATGAACTCTGATATTGCAATTGGAGAGCAAGGAGAACCCAATGCTTCGATGGCTAACCAAGGCGGTGGCGAAAATCTCGAATCTATCATTGTGCAGGAAAATGGAAGGGAAGATGCTCGATCTGGAGAGGAGATAATGATGGTAGAAGGCACTATCTGCAATCCAGAAACAGATCCCGAAAGCATTGCAAGGAAGCAAAATATACACCCTGAAAAAGAGATAGAACTAAGTCCTGGGAAAAAAGTTGAAGAATTGCCACCTGTCACCAAAGTAGACAAAGAGAATGATCTTGGCACGATTCCAGAATGCCATGAAAATAAAGATATCGAAGCATCACCTCAACAAATTAAAGATTTGAAGACAGGACTCGAGGAAAAGATTAAGCTTCGAGACGTATTAAGACATGCAAACCCAATTCGAAATTTTAAGTTGTTAGTGCAGTGTTTGAAGGAAAATGGAAACGTGAAGTTAGCTTATGTTCTATTCTTACTGATGGCGTTTGGGACATTTGCGTACACTACAGAGATGTTTGTAATGGTGAATTACTTGAAGAACCGTCCATTCTTTCTTGATGCTAGAAATATCGGCTTTTTATTGGCTTCTGACAGTGGAATTATAAGCATCGTTGGCCTTGGATTCTTCAGTTTCCTCATGACGAAAGTGTTCAAACTGAATGATTACGTCATCGTCGCAATAACATTTGCTACACTGTTGCTTTATTACGTTCTTCTTGGCATTGCAAATTCGTTGTTGATGCTGTATCTCATTCAAGTTGTACATGCTGCCGGTGCCTTAGTGATCCCCACTTTGCGATCCATGCTTTCCAAACTTGTTCCACCGTCTTCCATCGGGGTTTTGATGGGAGCCCTTCTAATGGTAGAAACATTTGCAGAGCTAATTGCATCAATAGTGGGTCCTTTTGCCTATGCCGGATTGGTGGCGTCTTATCCCGGTGCAGTGTTCTTTGTGGTTGCAGGGATAGCACTCTTGGCAACGATCATATCTGTGGGAATGCTTTGCAAGAGGCGTAATATTGAGGAAAGACATGCCGTTAGTTTGGAAGGAGCTACCAATAACATTGCTTATGTTGTCTGAACTATTTTATCTAGATCTGATATGTTGAACTCCCGGGGATGTGGGGGTAACTTCCATATTTAAAGCAACGGGCACGTGCCGCCCATAAGGATGTGGTTTGAGCCTCGAAAATCCCTGAatacactcctttataagaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00063 all species →	Myosin_head	Myosin head (motor domain)	Domain	Interproscan
PF07690 all species →	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001609 all species →	Domain	Myosin head, motor domain	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR052409 all species →	Family	Myosin-III family with kinase activity	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR011701 all species →	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46256 all species →	AGAP011099-PA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003774 all species →	Molecular Function	cytoskeletal motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016459 all species →	Cellular Component	myosin complex	Interproscan
GO:0000146 all species →	Molecular Function	microfilament motor activity	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0030832 all species →	Biological Process	regulation of actin filament length	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold1685.g2.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.