Detailed information of scaffold1690.g2.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold1690:5179...40594
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21188
all species →
BRR2_plugPre-mRNA-splicing helicase BRR2 plug domainDomainInterproscan
PF18149
all species →
Helicase_PWIN-terminal helicase PWI domainDomainInterproscan
PF00270
all species →
DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271
all species →
Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF02889
all species →
Sec63Sec63 Brl domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048863
all species →
DomainPre-mRNA-splicing helicase BRR2-like, plug domainInterproscan
IPR035892
all species →
Homologous_superfamilyC2 domain superfamilyInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041094
all species →
DomainBrr2, N-terminal helicase PWI domainInterproscan
IPR050474
all species →
FamilyHelicase Hel308/SKI2Interproscan
IPR011545
all species →
DomainDEAD/DEAH box helicase domainInterproscan
IPR003593
all species →
DomainAAA+ ATPase domainInterproscan
IPR014001
all species →
DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650
all species →
DomainHelicase, C-terminal domain-likeInterproscan
IPR004179
all species →
DomainSec63 domainInterproscan
IPR036390
all species →
Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388
all species →
Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47961
all species →
DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold1690.g2.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP