Gene detail

Detailed information of scaffold17.g73.t1 in Morbakka virulenta

Genomic Location: scaffold17:2176582...2194384
NR annotation: CAH1240701.1, PARK7 [Branchiostoma lanceolatum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold17.g73.t1

GGTGGGTGTTTCAGGATCAACTTTAGAAGGGGAGAACGCGTACTACGTGGAAATCAATTTCTTTTTTCAGGTGATACATTTTGTGACATCTAATCAAAATGAAGAGTGCCCTTGTCGTGCTTGCGGAAGGTGCAGAGGAAATGGAGACAGTCATTACAGTGGACGTACTTCGGCGAGGAAAGGTTGATGTAACTGTTGCTGGATTAGACAGCAGTAATCCAATAAAATGCAGCAGGGGTGTATATATTAAGCCTGATACCACTCTTGAAATGGCCAAAGGGAAGGGATTGTATGACGTTGTTGTCATGCCAGGAGGAGATGCTGGAGCAAAAGCTTTGGGCAAGTCACCAGTTGTCAAGGACGTACTTGTAGAGCATGAAAAGAATGGAAAGCTTATTGCAGCCATCTGTGCAGgcgagtgacaactaatgacctagggctaataaggtactttctcctatctttcacatctcaagaacttttcttaggattctagctgttcctaataaagctgtcttctgcatgtccactatgttaggttcaatattcaatttttgaacccaatttttaaaccctttgctgacacttcctaatgctcctatcacaacaggaatcacctgcaccttcttcaaaccccaaagccttcccatctccctcttcaagtcttgatatttttcaaccttttccttttccttgtcttcgattcttttatctgctggaacggcaatgtcgattatgaagcaagatttctgctttttatcaatcaaaacaatgtctggccttcttgcctctattacattgtcgcattgaatattgatgtcccacagaatctttacttcttcactttctatcgcaccttcaggggaatgttcgtaccacttttcctgatgttctagcccgtttttcttgcatagatcccagtgaatccgttttgcaacaccgtcgtgtcttcgtttatattccttctgagccagtttttcacactcactgattacgtgttgcacgctttcacctcttttaccacacattctacataaagggctatcgctggtcttatcaattttatgctttatgtagttcgttcgaatcgcctgttcctgtgccgcgcatatcagagcctctgtttcaaccttcaagtcacttcttgtcaaccaatcccagttcttgtctttgtctattatatcggttgtctccctcgcaaactgaccatacatgttcttttccctccatctttgctggaactcttcccgctttcgcttcttgaactcactgttatttactgttccttcagtttgaattgttctagcatctttaacagcaactaaaagaggttcctcagagcttaagacatactggccaagactgttttcctctgcattcaccaccacttccacactactcaatcccctaccaccatcttttcgtttgatatatagcctatccacgtcacttttcggatgaaacgcaccatgcattgtcatcgtctttctggtcttcctatcaatcgtctttaattcactctctttccatccaatgatccccgctccgtacctgaaaatcgctactgcccaagtgttaatcgccgtgatcttattttttgcatttaatttggatttcaaaattaatcttaaccttcttttatactctttcgttgttttactcttcatctcatcttctctaattttgtcgagttcgactattcctaagtaggtatagccatgctcctcaacctccttcattatttccccactagggagatctataccctcgcatctgcttatttttcccctcttcataatcaacactccacattttttgattccgaattccatgcctatatcttcgctaaaaatgtgaacagttttcactagcaaatcaatttgggtctcatctttaccatagagctttaaatcatccataaacagaaggtgatttaaagatacttgtctccgattcaattcataccgtgcgctgacttttcttaaaactaaagacattgggatcat

Protein

Uniprot

Uniprot term	Description
Q7TQ35	Parkinson disease protein 7 homolog OS=Mesocricetus auratus OX=10036 GN=PARK7 PE=1 SV=1
Q99LX0	Parkinson disease protein 7 homolog OS=Mus musculus OX=10090 GN=Park7 PE=1 SV=1
O88767	Parkinson disease protein 7 homolog OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01965	DJ-1_PfpI	DJ-1/PfpI family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050325	Family	Protein/nucleic acid deglycase	Interproscan
IPR029062	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR002818	Domain	DJ-1/PfpI	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48094	PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006979	Biological Process	response to oxidative stress	Interproscan
GO:0046295	Biological Process	glycolate biosynthetic process	Interproscan
GO:1901215	Biological Process	obsolete negative regulation of neuron death	Interproscan
GO:1903189	Biological Process	glyoxal metabolic process	Interproscan