Detailed information of scaffold177.g1.t3 in Morbakka virulenta

Genomic Location: scaffold177:1...172210
NR annotation: XP_047124905.1, utrophin-like isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P11533Dystrophin OS=Gallus gallus OX=9031 GN=DMD PE=2 SV=1
P11532Dystrophin OS=Homo sapiens OX=9606 GN=DMD PE=1 SV=4
P11530Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09069EF-hand_3EF-handDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF09068EF-hand_2EF handDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF00397WWWW domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR050774FamilyKCMF1 and DystrophinInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR015154DomainEF-hand domain, type 2Interproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR015153DomainEF-hand domain, type 1Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR036020Homologous_superfamilyWW domain superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR001202DomainWW domainInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR035436FamilyDystrophin/utrophinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12268E3 UBIQUITIN-PROTEIN LIGASE KCMF1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0099536Biological Processsynaptic signalingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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