Detailed information of scaffold178.g9.t1 in Morbakka virulenta

Genomic Location: scaffold178:387085...438445
NR annotation: XP_055998449.1, uncharacterized protein K02A2.6-like isoform X1 [Ostrea edulis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P33610DNA primase large subunit OS=Mus musculus OX=10090 GN=Prim2 PE=1 SV=1
O89044DNA primase large subunit OS=Rattus norvegicus OX=10116 GN=Prim2 PE=2 SV=1
P49643DNA primase large subunit OS=Homo sapiens OX=9606 GN=PRIM2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF04104DNA_primase_lrgEukaryotic and archaeal DNA primase, large subunitFamilyInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR007238FamilyDNA primase large subunit, eukaryotic/archaealInterproscan
IPR016558FamilyDNA primase, large subunit, eukaryoticInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0006269Biological ProcessDNA replication, synthesis of primerInterproscan

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