Gene detail

Detailed information of scaffold185.g29.t1 in Morbakka virulenta

Genomic Location: scaffold185:1288633...1305636
NR annotation: CAH3168635.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold185.g29.t1

GTTACAAATGTGCTGTATTTTTAACTGCCATTTCTGTATTTAGTTAATATCAGGAGAACACTTTGGCGCTTTAGCGATGAGTGAATCTAATGCAGGATCTGATGTTGTGTCAATGAAACTTAGAGCAGACAAAAAAGACGACTACTATATTTTGAATGGAAGCAAGTTCTGGATAACAAATGGTCCAGATGCTGATGTTTTGGTTGTTTACGCAAAGACAGATCTTACAAAAAATGAACATGGAATTACCACATTTTTGATTGAAAAGGGAATGGAAGGATTTTCTACGAATATTAAATTGGATAAATTAGGAATGAGAGGCTCAAACACTTGTGAACTCATCTTTGAAGATTGCAAAGTACCAGCCAAGAATGTCATGGGTGCGGTCAACAAAGGTGTCTATGTTCTGTTTAGTGGGCTTGACTTGGAGCGTCTGATATTATCAGCTGGACCAATTGGAATAATGCAAGCTGCCATTGACATAGCATTTCCTTACGTTCATACAAGGACTGCCTTTGGAAAGAAAATCGGCCAATTTCAGCTGGTTCAAGGAAAGTTGGCGGATATGTATGTTCGGCTGAATGCTACAAGATCGTATGTGTATGCAGTTGCAACAGCATGTGATAATGGGCATTTCAGTGGCAAGGACTGCGCTGGAGTTATCCTATACGCTGCAGAGAATGCCACACAAGTTGCACTTGATGCGATCCAATGCCTGGGTGGTAATGGCTACATTAATGATTACCCAACTGGCCGGCTGTTAAGAGACGCAAAATTGTACGAGATAGGTGCTGGTACGAGTGAAATAAGACGATGGCTGATTGGACGGGAAATTAACAAAGAATATAGATAGCCTGTGTATTCGGATTGTTACTTAAATGAAAATTACGATAGAGGGTGCGTCGAATGTGATGTAATTTGCTTATCACATTAGAGCATGTTATTCATAGACACAAGTATATCTATTTACAAGTAGGCCATTCAGGCGTTACAACTTGTCTTTTACTACAATTTACCAGACACCCAGTCTGTACGTGAAAGAGTGTTTCTCTGTGTGTGTGCATTGATGATTATTGACATAATGGAGTAGTTGTGTAATGTAATGGTTGTTTTGGGTATTGCTGTTAAGCTGGGAAACAAAACAGCTACTTATTTTTAACTTGGTTTTATTACTTTGCTTGACATTTGAAAATGATGATAGTGGCGCCCTCAACTTTTTATTTGCTTGCCACTTTTTAGATCGTGGTTTTGATGCCCCAAAGTGTAGCTGCGAGAGATATAATATTCATTAGCAATAGGGTATCGTTTTCAAAACAGTGCTTTAAATCAACCCTTGCAGCTTGTGAACTTTGTTATTGCCCTATAACAAACGTGTGTGTGAACAAATCAATTGAATTGGCATGACCTGGATGTAACATGCGTAAATAACAATACCATTAATATGAATAACTGTCAATTACAAATGCAAAAACATTGCACTTAACGTAATTAATCGTTTTGAAAGCTAGTAACCAGAGATAAAATATAAAATATATCCTTTCTTGTATCTGACGTAATATCAAGGGGCATTTAATTGAATTTGATCTTTACTAGCCATCCCAGTCACATTATTACTGTTTTTAGAGTTAGCATTTGGATATTTATCATTACTGTAATAATCCTTTTTATAGCATTTCCAGTACTTTTCAAAGCGTATCAAATTGTTCTAGCCTCTCCCCAATGAAGTTAGGAATATTTTGGACCTTAAACGTTTTGGAAGGGCGCAAGTACCTTGTTGCCTCATAAAGAGCAGTGAATGTAGTGAAAATAATGAGTTGAAGGGAGTATATGGATAGATTTGTGAATGCTCTCCTTCTATGTTGAAGACGCATGCACCTAGAAATAAGCTACTGAAAGATCGTCTGTTCATTGTGGTAATTTTCAGGTAGAGCTAATCACTAAAGTGAATCCAAGAGATTTGTGATTACTAAGGTTCGCTAAATCGTCAAGGTAATTAAGAAACCCATCATAAAATTGTGATAAAGTCAGTATAAACATCAGTGCTGACGAGTATATTTTGATGAACTGAATCGACTATATTTATTATTTATGTATTTCGTATTCCGGTTACACCGAGGAAAACCCATTTTTCAGATTCAGTGGCCAAGGCACTGAGTAATAACAATCAGAATGCTAACTGAAATTCTTTCTCCCGTCAATTCACGGTTCCTTTGCGAAGAAAAGCGACCACTGACGAGGGACTTTTTAACACGATACCTTCATATAAATGATACATACACCGTTTTGTGATTGGTAGCGTGAAATAACCATTTTTTTAAAGTTTGTGAATAGGCTTTTTTTCCAGCTTAGATTTTACATAATTTTGGCATCATTTTTTATTAATTCAGTACTTAATGACTTAAATGGCTTAGACATAGTAAGGACTGGAAAATTTACACAACCCGTTCCATGTTTAAAAGATTAATGGGCGTAGTTAGAGTAGACAAGGAACGATACTGCGTGTGGCTTGCAAACGTTTTAGTTTCAGGAGTATGCCCCAACANGCGTGAAATAACCATTTTTTTAAAGT

Protein

Uniprot

Uniprot term	Description
Q9JHI5	Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Ivd PE=1 SV=1
P12007	Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2
Q5RBD5	Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii OX=9601 GN=IVD PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00441	Acyl-CoA_dh_1	Acyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006089	Conserved_site	Acyl-CoA dehydrogenase, conserved site	Interproscan
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR009075	Domain	Acyl-CoA dehydrogenase/oxidase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43884	ACYL-COA DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003995	Molecular Function	acyl-CoA dehydrogenase activity	Interproscan
GO:0006552	Biological Process	L-leucine catabolic process	Interproscan
GO:0008470	Molecular Function	3-methylbutanoyl-CoA dehydrogenase activity	Interproscan
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan