Detailed information of scaffold189.g3.t2 in Morbakka virulenta

Genomic Location: scaffold189:31036...52975
NR annotation: KAI4793525.1, hypothetical protein KUCAC02_032659 [Chaenocephalus aceratus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5R452Scaffold attachment factor B1 OS=Pongo abelii OX=9601 GN=SAFB PE=2 SV=1
Q15424Scaffold attachment factor B1 OS=Homo sapiens OX=9606 GN=SAFB PE=1 SV=4
Q14151Scaffold attachment factor B2 OS=Homo sapiens OX=9606 GN=SAFB2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR051738FamilyScaffold Attachment Factor and ModulatorsInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15683SCAFFOLD ATTACHMENT FACTOR B-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0050684Biological Processregulation of mRNA processingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

TOP