Gene detail

Detailed information of scaffold19.g19.t1 in Morbakka virulenta

Genomic Location: scaffold19:531709...542779
NR annotation: RMX60511.1, hypothetical protein pdam_00001432, partial [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold19.g19.t1

GTAGGTACATAGCTGATTATTTATGTAACAAAAATATTAATGTCAAATCTCAATCTACTTTGTTGGAACGAAAAAATAATTTTCGTAGAAATGACACCATAGACAACGTTACAACCTTTTTTAGATCTCTGCACCTTTCCTTCGCACCATTTCCTTCTATTGACTGTAGTTGGATGCATTACGTTCGACTGTTAGGAACAACCGGCTCTGTACTTCTAATCAAACTTGACCCACCCAATATTCTAGAGATCGTCTTTGTGATCCTGTTAATTCTGACATTCTCCAATCCAACTGTATAGATCCTGCTTACAGCTCTCTGTAGTTTAGGATTTGTGCTAATGATTGCTCTTAATACTCTCATGGAGGTACCAAGAAGCCTCTCAGGTTTCATTGATAAAATAGTGTTTTCAGTTGTGACACATACAAAGGAACTGTCATTCAAAAAGTACTTTAACATTTTGTATTCCAAGTGCCAATTCATTTGTTTTTCCATTTGTAAAACTAAGTCTGAACTATTTGAACGGTTAACTAATTGCCATTATTTTCAATTATGGTAAATGTTACTATCGCTAAAATATTGGCTCGATATgggttcgattctctgagtgagcgaaaagaatttgaaacgttgcaaaatataaagccattggttgccgtcaggatgtgtatccgaccaagaaattcctcacagtcgaaacaaaatccctctgaaaggcactgtctgagtctcaattttttgggaaaaatgacgttaaaacCCAAAAATTAGAATCTAACTGTACTTTTATGCATTACCAGGAACCTCTTTATTTTTTTCTTTGCTTTCAACATATTTCATGTTAACAATTTTTCTGTTAGCATTTCATTTTTGTACTGTACTAAACCTAGGAATTACCAGAATGTCTCTGCGATAATCAATTTGCTTCTACTCTTTAAATTGGTCTTTAATTAATATTATTTCATTTCTTTTCTAAAGCATTTGCTGCCGGTTAAGATGCTTAGCAAGTACAACACTGATAGCTCGGTTAAAGCGATGGTAGACAGAATGGATTGGGTTGTACTTCCGGTTTTTAATGTTGACGGCTACGCATATAGTTGGAGAAGCACAAGTACAAGGTTTTGGCGTAAAACGCGAAGACCAAATAGGAACTCAAGGTGTGTAGGAACTGATCCAAACAGAAACTGGGATACTCATTTTGGTGATGCTACGACTGGTGGAAGCAATGATTGGGTTTATGAGAAGTTAGGAGTGGTATATGCGTATGCTCTGGAACTAAGGGACACCGGAAGGCACGGCTTCTTGCTTCCAGCCACAGAAATCATACCAACTGGTGAAGAAACCTTTGCTGGATTTAAAGCAATGGCAGCTGCCATGAAAATATAAAATATTAGCTTGGTTTCCTTTTTTTGGATGAGTAAATAATGACACAATAATATTCTTAAACGGTTTGTTAAATAACGGAATAGAAAGAAAAGATATTGAAAAGTGAAACAAATGCCCTAATTTTTTCAGTCTAGCATTATATTCAGGCATACTCAGCAACAAATCCTTTCTATGTGGAAATTTAACACTGCTTCGTTGTGAAAAGTGATCTGAATAAAAAATACGGTAAAATACACGCGTTTTTGaataaaataaaacacgataaagtaaggcaaaataCATAAGAAGTTATAAGCGCGTGCATGTGGTGGATTACAAAGCATTAAAATGAATGTACTTTTAAATGTCCCAATTTCAGCTGGAGATTGAAGAATTAAGTTTATAGTTACGCTAAATGATGTATCCGAGTTAAGCAATTGAGCTGTATGGGCCAGAAAAACAACTCCTAGGAGGTCTAAGGAAGGTCAACAGATAAGACGGTATACATAAGGGTAGAACCAACAGCTACAAAAAAACTAGGAAAACTAGGCTGGCAGATGGGGTTTTTCAGAAGAGGAGTCTGGGCATGATCAAGGGTGAATCACAAGATGTTAAAATTTCTCAGACGATTAGTTAGTGTCAGAAGTAGATTTCTGCTGCAACAATAGAAGTGGCAACTATAGTTTTATTATGTTAACAATAGATTGATTATGACTATAAATATTCCATTCTGAG

Protein

Uniprot

Uniprot term	Description
Q6P8K8	Carboxypeptidase A4 OS=Mus musculus OX=10090 GN=Cpa4 PE=2 SV=2
P09955	Carboxypeptidase B OS=Sus scrofa OX=9823 GN=CPB1 PE=1 SV=5
P15086	Carboxypeptidase B OS=Homo sapiens OX=9606 GN=CPB1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00246	Peptidase_M14	Zinc carboxypeptidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000834	Domain	Peptidase M14, carboxypeptidase A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11705	PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004181	Molecular Function	metallocarboxypeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan