Gene detail

Detailed information of scaffold192.g17.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold192:229607...254214
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold192.g17.t2

cgtcttttgcagcgtttaactctgctgttggattgccctgtgttgcagttatttccttgatgaaaccaaaccttttagtgtgtgctatgatctttgaaagccttagtgacatttaggtatttctgaatttgttgcaggcaaaaaaccccaaggacattgtttgtttgtgttgtcagttctcgtgttgtctagcttttgatgttatttccgcgactaaaacaaatattccaatttcttttatggtctttgaaagtgttgatacaataagctactctgtatgattgaaagtagacctacacttctttcacaactgcaaaagctttaattcttcaaaccttctctgtgttattgtcgctgattttttgtgcatgattcttttgctcatgtgttttggtttgcattttgatatagcctcgtttcaggcatggcctcgctattttcccaatcactaatatataacgcgcatgcgtaattgtctttctgccaaattcgaaaaatttgaagccaccgtttgccaaacatgagatgagaaaagatcttttatgtatgttgtttttagtatccatttgctctaaatgaatgaagcaagaataaaagaattgcatcatgaattccacagattcaagaagccaaccattgctgctggatacgctgggtgaatatgactttggagtggaggcaatatactacatatctgcagcacagaaaaagcttgactctgggaacatagaagaatgtttggaaatcatcaaactggggattcaaagaaaagcaaagcctgcagaagctttatcgagggcacatcaaaatgctgttaacagagaaaagaaattgtggggacttcctccatcagcaaggaagaagaaaatgtcaaagcaaagtaacccagaacgaccagctacaaattgtatgaagtcagcagagaaagaacgaatacaaaagaagagcgttacaggaaatcaagacctgatgtcttcatcaaagattttccaatcgatcacgagaagaagaaatttaaagcttccaccacctgtaaaggcaacaccaaaggattctaagttgtcccgaatttctataaagaagcttgaagaatctccattaccaacaggagccatgttcactccatctcctccaaaaagagcgcatgttgccgcaaattacgatgggatcaagccacatcttgattttgaggagaaggaaaattttggcgacgttttaacctctgatggttttaagacgccactaccggtttcaaggcacgaaccagcattaggtaaatttgaaagcaagaagcctctggcagcatcagccagagaagcattggttttaccaaaggacagccggggggaaatacacgacaaagttgaaacgcaagttgggaatactggatgcacggctcataataaggcacgcttgaatgaagaacggttctctgatgttaaccattgtttgagtttttctgacaaagatgatatgctgttgtcaagcttggcgacttctgccttacatatcagtggctgtgaatctatggatgcttcattaagaagcaacacatcagtaacccttcatgcatattcaaattccctgctgcaaaaaccaccccgttcatcgaagacgtatgcgggagagtcacttgtcaaaggcccctcttttgcaaagaggactgaaccactggtccaaaaagtatgcgaggaaagcgagacgtgcagctcagaaagccctagtaccctgctggaaaatgacatagtctctgattgtttcagcgaccggttttcttgtcatacagacacgaattttaattctgggaaaatgaggtacagtagtgatagtggtttctcagaagcagccttaaacggtgctgcaccattgctagagtctgaaaatcaagatggaaaaagggttataactcatgaattcgctaaaagttctgataactttagtgttggcgtaaaggaacggagagtggctcaagaggcccataatatcaaaatccagaaagtcacaacaacagctgtagccagcaaactgcccaatgaagtcgaggcaccaaaaatatcggtctcccaaatttctaaaactccagaaatcatgaaaacattctcgctggatagtattcaggctcaggaggatcgtaaacctctttctaacatcccacagtcattcaagatgccaattgctcccgttcctagattccctcatgctgaacagaacaagagcgctgcattggtgaaacagccaattgggtcacaaagcagcgagactgttcaagaaagcaatccgattgcaactcccccctcacagagaaaggatgtatcggcctatttgttacagaggaaagatgctgctgtcgctgccaaaatgaagtcatatagtacaacgaagaaaaataaagtgcttcatataaagaaggaacggtataaagtgatatctgtcctcggaaaaggtggttccagcaaggtatttgaagtgttaaatgaagatgacaaggccttcgcgatgaaatgtgtccgattggatgacctggaaaattttatgtttgaatcctacctaaatgaaattgagattctagagtcactcagaaatgatccatatattatcaacctgcatgaatatgaaataaagaacgaagtgctctttatgttaatggagaaaggagaaatggatttagagaaatacctacacctaaatcgaacgatggaaaacaagcaaatgcgaactgtttggaggcagatgctatgtgcagtgagcagaatacatagacaaggaattattcacactgatttgaaaccagccaatttcttgttcgttgattcagcgctgaaacttatcgattttggaatcgccaaaggactacaggatgattgtacaagtttacaacgagactgcctgatcggcacgctaaattacatggctcctgaatctgtttctgagacgaatcatggacttggcgaagtaaatggatcgaaaaagaattacaaaattcgaagagccaccgatatatggagccttggatgtatattgtacttaatggtttatggcaaaactccattccagcacattaaaaacagaggattgaaagtcgtcgaaatcacagaaggacgggatatcgctttccctgatattgagaataaagatcttcttgatacgatgaagggatgtttacaaagaaatccattgcagcgctacactattgatcaactcctcgcacacccgttcgtcaccggaaaggaatcacccattccagctccagatgatgaaaacgaaatggaatctttaaagagcagagatctggacttgtttatgcagaaagtaaaaaaatccacagttaattcaccaaattcaatacaaagggcacaaaagagcttggcaagaagaggtcttgttggcatgaatcctgtaagaaaggcaattttctagtatgcaagaatttattaccataacgatgaattaaaatgacacacatgcatatgcatcttgcttgtctcacgttgtggaaactgctgttcatagactgtaaggtatttatgacttcgaaccctggttttcatttgatgctctgttcaagagcagatttcctaacaatagcctcgatttttcttgattgacacgtgatttgagatcatatctgtggtgccgcatgcacgccgatcttacccaaaaactaaatgcagaagagaaaacatggagtggggcctgtaaatcgattcgtggtaaaaccagctctgtatctttattactttctccgttttgattttcgtaaaggtactcaaaaatttgtctccaaaaaactggggtttccctgtgcgcatttgaaaaatttgatttgtatcctctgaaggcccagtctgctcctggaattctcttaccttgaagatgaataaagtaaacacccgcgtataaggacataaaatcttgcaagtcagcttgagttcttctgaattagatacagaaaatggacaggacaaacgttcagatctacccttctcttttccacactactcttgacttccttggcaaagccttttcgcttgcacaacgagatagtcagccatactggtttcagggcatctttaacggctttgcatattttgatttgctgctgctggagagaaaaactgggactattgtttaaactgaaactgggactatagtttaaacatc

Transcript

scaffold192.g17.t2

CGTCTTTTGCAGCGTTTAACTCTGCTGTTGGATTGCCCTGTGTTGCAGTTATTTCCTTGATGAAACCAAACCTTTTAGTGTGTGCTATGATCTTTGAAAGCCTTAGTGACATTTAGGTATTTCTGAATTTGTTGCAGGCAAAAAACCCCAAGGACATTGTTTGTTTGTGTTGTCAGTTCTCGTGTTGTCTAGCTTTTGATGTTATTTCCGCGACTAAAACAAATATTCCAATTTCTTTTATGGTCTTTGAAAGTGTTGATACAATAAGCTACTCTGTATGATTGAAAGTAGACCTACACTTCTTTCACAACTGCAAAAGCTTTAATTCTTCAAACCTTCTCTGTGTTATTGTCGCTGATTTTTTGTGCATGATTCTTTTGCTCATGTGTTTTGGTTTGCATTTTGATATAGCCTCGTTTCAGGCATGGCCTCGCTATTTTCCCAATCACTAATATATAACGCGCATGCGTAATTGTCTTTCTGCCAAATTCGAAAAATTTGAAGCCACCGTTTGCCAAACATGAGATGAGAAAAGATCTTTTATGTATGTTGTTTTTAGTATCCATTTGCTCTAAATGAATGAAGCAAGAATAAAAGAATTGCATCATGAATTCCACAGATTCAAGAAGCCAACCATTGCTGCTGGATACGCTGGGTGAATATGACTTTGGAGTGGAGGCAATATACTACATATCTGCAGCACAGAAAAAGCTTGACTCTGGGAACATAGAAGAATGTTTGGAAATCATCAAACTGGGGATTCAAAGAAAAGCAAAGCCTGCAGAAGCTTTATCGAGGGCACATCAAAATGCTGTTAACAGAGAAAAGAAATTGTGGGGACTTCCTCCATCAGCAAGGAAGAAGAAAATGTCAAAGCAAAGTAACCCAGAACGACCAGCTACAAATTGTATGAAGTCAGCAGAGAAAGAACGAATACAAAAGAAGAGCGTTACAGGAAATCAAGACCTGATGTCTTCATCAAAGATTTTCCAATCGATCACGAGAAGAAGAAATTTAAAGCTTCCACCACCTGTAAAGGCAACACCAAAGGATTCTAAGTTGTCCCGAATTTCTATAAAGAAGCTTGAAGAATCTCCATTACCAACAGGAGCCATGTTCACTCCATCTCCTCCAAAAAGAGCGCATGTTGCCGCAAATTACGATGGGATCAAGCCACATCTTGATTTTGAGGAGAAGGAAAATTTTGGCGACGTTTTAACCTCTGATGGTTTTAAGACGCCACTACCGGTTTCAAGGCACGAACCAGCATTAGGTAAATTTGAAAGCAAGAAGCCTCTGGCAGCATCAGCCAGAGAAGCATTGGTTTTACCAAAGGACAGCCGGGGGGAAATACACGACAAAGTTGAAACGCAAGTTGGGAATACTGGATGCACGGCTCATAATAAGGCACGCTTGAATGAAGAACGGTTCTCTGATGTTAACCATTGTTTGAGTTTTTCTGACAAAGATGATATGCTGTTGTCAAGCTTGGCGACTTCTGCCTTACATATCAGTGGCTGTGAATCTATGGATGCTTCATTAAGAAGCAACACATCAGTAACCCTTCATGCATATTCAAATTCCCTGCTGCAAAAACCACCCCGTTCATCGAAGACGTATGCGGGAGAGTCACTTGTCAAAGGCCCCTCTTTTGCAAAGAGGACTGAACCACTGGTCCAAAAAGTATGCGAGGAAAGCGAGACGTGCAGCTCAGAAAGCCCTAGTACCCTGCTGGAAAATGACATAGTCTCTGATTGTTTCAGCGACCGGTTTTCTTGTCATACAGACACGAATTTTAATTCTGGGAAAATGAGGTACAGTAGTGATAGTGGTTTCTCAGAAGCAGCCTTAAACGGTGCTGCACCATTGCTAGAGTCTGAAAATCAAGATGGAAAAAGGGTTATAACTCATGAATTCGCTAAAAGTTCTGATAACTTTAGTGTTGGCGTAAAGGAACGGAGAGTGGCTCAAGAGGCCCATAATATCAAAATCCAGAAAGTCACAACAACAGCTGTAGCCAGCAAACTGCCCAATGAAGTCGAGGCACCAAAAATATCGGTCTCCCAAATTTCTAAAACTCCAGAAATCATGAAAACATTCTCGCTGGATAGTATTCAGGCTCAGGAGGATCGTAAACCTCTTTCTAACATCCCACAGTCATTCAAGATGCCAATTGCTCCCGTTCCTAGATTCCCTCATGCTGAACAGAACAAGAGCGCTGCATTGGTGAAACAGCCAATTGGGTCACAAAGCAGCGAGACTGTTCAAGAAAGCAATCCGATTGCAACTCCCCCCTCACAGAGAAAGGATGTATCGGCCTATTTGTTACAGAGGAAAGATGCTGCTGTCGCTGCCAAAATGAAGTCATATAGTACAACGAAGAAAAATAAAGTGCTTCATATAAAGAAGGAACGGTATAAAGTGATATCTGTCCTCGGAAAAGGTGGTTCCAGCAAGGTATTTGAAGTGTTAAATGAAGATGACAAGGCCTTCGCGATGAAATGTGTCCGATTGGATGACCTGGAAAATTTTATGTTTGAATCCTACCTAAATGAAATTGAGATTCTAGAGTCACTCAGAAATGATCCATATATTATCAACCTGCATGAATATGAAATAAAGAACGAAGTGCTCTTTATGTTAATGGAGAAAGGAGAAATGGATTTAGAGAAATACCTACACCTAAATCGAACGATGGAAAACAAGCAAATGCGAACTGTTTGGAGGCAGATGCTATGTGCAGTGAGCAGAATACATAGACAAGGAATTATTCACACTGATTTGAAACCAGCCAATTTCTTGTTCGTTGATTCAGCGCTGAAACTTATCGATTTTGGAATCGCCAAAGGACTACAGGATGATTGTACAAGTTTACAACGAGACTGCCTGATCGGCACGCTAAATTACATGGCTCCTGAATCTGTTTCTGAGACGAATCATGGACTTGGCGAAGTAAATGGATCGAAAAAGAATTACAAAATTCGAAGAGCCACCGATATATGGAGCCTTGGATGTATATTGTACTTAATGGTTTATGGCAAAACTCCATTCCAGCACATTAAAAACAGAGGATTGAAAGTCGTCGAAATCACAGAAGGACGGGATATCGCTTTCCCTGATATTGAGAATAAAGATCTTCTTGATACGATGAAGGGATGTTTACAAAGAAATCCATTGCAGCGCTACACTATTGATCAACTCCTCGCACACCCGTTCGTCACCGGAAAGGAATCACCCATTCCAGCTCCAGATGATGAAAACGAAATGGAATCTTTAAAGAGCAGAGATCTGGACTTGTTTATGCAGAAAGTAAAAAAATCCACAGTTAATTCACCAAATTCAATACAAAGGGCACAAAAGAGCTTGGCAAGAAGAGGTCTTGTTGGCATGAATCCTGTAAGAAAGGCAATTTTCTAGTATGCAAGAATTTATTACCATAACGATGAATTAAAATGACACACATGCATATGCATCTTGCTTGTCTCACGTTGTGGAAACTGCTGTTCATAGACTGTAAGGTATTTATGACTTCGAACCCTGGTTTTCATTTGATGCTCTGTTCAAGAGCAGATTTCCTAACAATAGCCTCGATTTTTCTTGATTGACACGTGATTTGAGATCATATCTGTGGTGCCGCATGCACGCCGATCTTACCCAAAAACTAAATGCAGAAGAGAAAACATGGAGTGGGGCCTGTAAATCGATTCGTGGTAAAACCAGCTCTGTATCTTTATTACTTTCTCCGTTTTGATTTTCGTAAAGGTACTCAAAAATTTGTCTCCAAAAAACTGGGGTTTCCCTGTGCGCATTTGAAAAATTTGATTTGTATCCTCTGAAGGCCCAGTCTGCTCCTGGAATTCTCTTACCTTGAAGATGAATAAAGTAAACACCCGCGTATAAGGACATAAAATCTTGCAAGTCAGCTTGAGTTcttctgaattagatacagaaaatggacaggacaaacgttcagatctacccttctcttttccacactactcttgacttccttggcaaagccttttcgcttgcacaacgagatagtcagccatactggtttcagggcatctttaacggctttgcatattttgatttgctgctgctggagagaaAAACTGGGACTATTGTTTAAACTGAAACTGGGACTATAGTTTAAACATC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22974 all species →	MIXED LINEAGE PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004712 all species →	Molecular Function	protein serine/threonine/tyrosine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0007059 all species →	Biological Process	chromosome segregation	Interproscan
GO:0007094 all species →	Biological Process	mitotic spindle assembly checkpoint signaling	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0033316 all species →	Biological Process	meiotic spindle assembly checkpoint signaling	Interproscan
GO:0034501 all species →	Biological Process	protein localization to kinetochore	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold192.g17.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.