Gene detail

Detailed information of scaffold192.g36.t2 in Aurelia aurita

Genomic Location: scaffold192:465600...487172
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI1 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold192.g36.t2

ttgacggttgcagcacaagaacagttcatcattggctctgaagtgatcaccatatagacgtgtttctcctttgaatgaccgaagaaataatcatgtataaggcttcagctaaagataaatacaagcagaacccaccaaagagtagtgtagcttcaaacacgatggagaaagctgcagcagcgccagagatagaccagattcttgttgatcgaactcgtaggccgcataagcagtaccttcgaggccgcttccttggcaagggtggattcgcaaaatgctacgaactcacagacatggacacgaaggaaattttcgcgggcaaaatcgttgcaaagtcattgcttcaaaaaccccatcagaaggaaaagatgtcaatggagatagaaattcatcgttctttgaatcatcaccatgttgttggttttcatcgattctttgaagataagaattttgtctatgttgtcttggaactttgtagaagaaggtccatgatggaacttcataagcggcgtaaagctcttactgaaccagaggctaggtattacatgaagcaaattgttgaaggatgttgctatttgcatgataccaacatcatccatcgtgatttgaaacttggaaatctgttccttgatgatgaaatggacatcaagattggtgattttggtttggctgcaaagtatgagggtgagcgtaaaaagacactttgtggcacaccgaattatattgcgcctgaagttctcagcaagaaaggtcatggctatgaagtagatgtttggtctttaggatgcatattgtataccctacttgttggtaagcctccattcgaaacatgttcactgaaagagacatacatgcgcataaagaagaatgaatactacatcccatcaaaagtttgccattccgcacagatgctcataatcaagatgcttaggccagatcctagtaatagaccaagagtgcacgagatcatgaacgatccattcttccaaggctactgcccatcaaaattacccattagttccttaactatggctccgcgtttctccgatatgcccacaactggaggcatacctgttaggaaaccactttcagagtttaatggtagacccagtgaagggctgttgcggtcaatccctgaaggcaaaaagacggacccactgaacaacgtcagtcgcgcagtctgcgtaaaagacggaataggacatgatgttgcagaggacccgtgcatggaaactgataacgctgagccagacgattgctatctaggacaattgcgcgtgatgttggagaaatgtcttgagtcaaagccagccgatagaattgttattcaaatggacgaggcagaagatccagcatcgacccccgtcttttggattagcaaatgggtggactattcagacaaatatggactaggttatcaactaaacaatggaagtgttggtgttttgttcaatgacacaactagattgcttatgaatgaagatggagagacccttcattatatcgatcgagatgcgtgcgagcatttccacacgataaaatcgcatcctcctagtctggaaaagaagaaaacattgcttgcctacttcactgattacatgaatgagaacctcctcaaggctggagctaatgtcacacctccaaagggttgtgaactttcaagattgcctttcctgaggacttggattagaaccagatgcgcaatagtgttacatctgagttgtggaataattcagataaacttctttcaagatcacactaaaataattgtgtgtccaatcatgggagcagtcacttacattgatgaagagaagaatttcaggaccttcaagctaagtgcaattgagcaatatggttgctctaaaggtcttgctagccgcctgaagtatgcaaagacaatggtagaaagacttcagagttcaaaaagcgggggccatggacggtgttaggtgaacgttttatcatatcttttgtttttttgcgaattcaagaattacctggatagcgtgctcggcgtagcataagcgtcaaaactacaaaaaagattgcacgaatggttaatgcgtcttctgtttgatttaatggcttgaaaggaacgtcgggtactttgctataattctattttcggtatttttgatatcttgattattttcagaattacagcgtttttcttttccttgaaagaaaaccttaatttaagaaggtctgtagtatggtggtaagcagaaatctgtagcttttctggtctacgatttagcaatttgatgacgtcacaacctcaaaactggttgaaacatagaagatgctgacctgacgttcctttcaaggcaatcaaacggaagatgcattagccactcgtgcaattatttttctttttaaaatttgaacctatactcatcatcatcattagcaaaatgcagtatactgctcggcctgttttgtattgtaatggtctgttttatggcatcacaaccaggcgatttattgggctatccgaagaacaaagaatggttctgaacaagatttctctattgtatttgataaccagcacgtgcgaggtttttctctcgaaattagtccacgtttccaagataagagcccgaaaaccttgtttgccagacatttgagatttgtttgccaagctatgtactcccgtttggccgcgtcgcaaaactttgtttgacaaacagaattatggagaatttgttgggtaaagtttctcaaaagttcacaaaattctcttcttgtcatcagccaacgatgactgtcaatcaatactttacgacgttgctatatacggacagatttcttgcttggcgatcaaaactcaatttttcctcatctggccaggactttggatgcgaaaatttgctaccgctccagagttaaagacccattacacaccaacaaaacggcgcacgtgtttacagcgcctttgcagaatttctgtttcagagattgtagcgggcctgcagacttcttaacagaacagactactatgcaatggatctttaagccaggatcatattgggttgctgttgtcgttagaatagcagggaacgaacgactcgagagacccaaaaggctgaatgtgagaaattaaggagtttattttcaccgttcacattcggtatttggggttttagggtagttgtggttgtttgttgcgacgactccagcaactgcaatgacctaacgagaaccaggctttaaaggacaactccggggtttgtaaaattaatgttagaaaacaaacttaccatctcctgaatcaaatgacaaacttttttccgcatttagacttctgtttcatgtgtcaattcaataaatatcttagtaatctaggccaaatgtccctctatcggtctccattttgtccacgataaggacgctagtcacgattcagagacgagaaaataatagggctgcctcgttcccagagggctttgagatgacttcagttcgcaattgtcactttttatgacgtcactgcgcagtggtcgctttttaatacgtaatttcgcagagaaaagaggaaaaatagttgaaaaaaggacgatacaccattcataacagcacaatgtttcattttatcatcaattataccaaccccggaatttgcaaacttactattgagcgtcttacacaagattccagtagtaggcatagaataggaatcattttctttgctcgtgtacatttctgaacaatgataagagctctgtttttctacccacccaagaattaaaacaaggctatgatatgatgactgaaaagtttcctaaactaattgttttgtagagagtttttaaagcaggcttgcgcagtacagtaataaacccgcatataagaaccataatttacgagctcatctagtggcggaattgagggagggggcaagcgccttcccttttcgtgaagaatactatgcttcgcgccatcttttgggtgaaatgcctggcccttattgcgacacaaacccactcttttttacgtcttcgggctagatataacaacaacgtaaattaaggtatttgaccgttcgtgaaagtacttatttttgatcgaaaagtgagcctagaggcttgccattttcgttaaattttgtagcttataaaagtagttattttcatctaaaagtaggcctctctcactaaattcgggagatttgaaaatggctatttttgaataaaggttttgcctttttcgacaagatctaaaaaaaatcatgtttttgactcaactccactcccaatgatatttcactgtttatttgtctgccgaaagagatgtcatgagaattcatagcaataatttgggacatggttaagcaggattcatgcagtcggcatgacgtcagatcagcgttgaaaacacgacaccatcttgttttggggtaaatcttcagaaaatttgtataggtttctggtggatatttgcacaaagttgcataacattgctcttatattctccttcgcgatagtgcgtaggaaaaagatatgtagcaattgtcagtcagacttaaatcaatgaaacaattgcacgaataagctgttcttgaaaacaaaacataaacttattccaagaaaactgtgagaaacttgcctttgcgatgataattttgtaaccagcgccacaaactccgtcagctgtatgttgctcgtcgcttcttcaaattcagtcttccttttagacattcgcttatctatccgctaaagttttggaatgatctcaacagctttcaaatttttagaattgatttatttcgataaacaaacgagacactctatgttttgtaatagcttcatttgcccgttttgtaatagcttcaaagactgattttcaagagcgaattgataaagtcacgtgacatgtcgtctgtatggatagactcacctaagtaggttcttatatgcgtttttatgtataaagaaaattggaagaacagttactgtcctgaatatcgtagccctagatttgtacagcacataacctggtcataacgtagttgagaaaagttttcctgaatatcgtagccctagatttgtacagtacataacctggtcatacgtcataacgtagttgaaaaaagttttcccgtgatt

Transcript

scaffold192.g36.t2

TTGACGGTTGCAGCACAAGAACAGTTCATCATTGGCTCTGAAGTGATCACCATATAGACGTGTTTCTCCTTTGAATGACCGAAGAAATAATCATGTATAAGGCTTCAGCTAAAGATAAATACAAGCAGAACCCACCAAAGAGTAGTGTAGCTTCAAACACGATGGAGAAAGCTGCAGCAGCGCCAGAGATAGACCAGATTCTTGTTGATCGAACTCGTAGGCCGCATAAGCAGTACCTTCGAGGCCGCTTCCTTGGCAAGGGTGGATTCGCAAAATGCTACGAACTCACAGACATGGACACGAAGGAAATTTTCGCGGGCAAAATCGTTGCAAAGTCATTGCTTCAAAAACCCCATCAGAAGGAAAAGATGTCAATGGAGATAGAAATTCATCGTTCTTTGAATCATCACCATGTTGTTGGTTTTCATCGATTCTTTGAAGATAAGAATTTTGTCTATGTTGTCTTGGAACTTTGTAGAAGAAGGTCCATGATGGAACTTCATAAGCGGCGTAAAGCTCTTACTGAACCAGAGGCTAGGTATTACATGAAGCAAATTGTTGAAGGATGTTGCTATTTGCATGATACCAACATCATCCATCGTGATTTGAAACTTGGAAATCTGTTCCTTGATGATGAAATGGACATCAAGATTGGTGATTTTGGTTTGGCTGCAAAGTATGAGGGTGAGCGTAAAAAGACACTTTGTGGCACACCGAATTATATTGCGCCTGAAGTTCTCAGCAAGAAAGGTCATGGCTATGAAGTAGATGTTTGGTCTTTAGGATGCATATTGTATACCCTACTTGTTGGTAAGCCTCCATTCGAAACATGTTCACTGAAAGAGACATACATGCGCATAAAGAAGAATGAATACTACATCCCATCAAAAGTTTGCCATTCCGCACAGATGCTCATAATCAAGATGCTTAGGCCAGATCCTAGTAATAGACCAAGAGTGCACGAGATCATGAACGATCCATTCTTCCAAGGCTACTGCCCATCAAAATTACCCATTAGTTCCTTAACTATGGCTCCGCGTTTCTCCGATATGCCCACAACTGGAGGCATACCTGTTAGGAAACCACTTTCAGAGTTTAATGGTAGACCCAGTGAAGGGCTGTTGCGGTCAATCCCTGAAGGCAAAAAGACGGACCCACTGAACAACGTCAGTCGCGCAGTCTGCGTAAAAGACGGAATAGGACATGATGTTGCAGAGGACCCGTGCATGGAAACTGATAACGCTGAGCCAGACGATTGCTATCTAGGACAATTGCGCGTGATGTTGGAGAAATGTCTTGAGTCAAAGCCAGCCGATAGAATTGTTATTCAAATGGACGAGGCAGAAGATCCAGCATCGACCCCCGTCTTTTGGATTAGCAAATGGGTGGACTATTCAGACAAATATGGACTAGGTTATCAACTAAACAATGGAAGTGTTGGTGTTTTGTTCAATGACACAACTAGATTGCTTATGAATGAAGATGGAGAGACCCTTCATTATATCGATCGAGATGCGTGCGAGCATTTCCACACGATAAAATCGCATCCTCCTAGTCTGGAAAAGAAGAAAACATTGCTTGCCTACTTCACTGATTACATGAATGAGAACCTCCTCAAGGCTGGAGCTAATGTCACACCTCCAAAGGGTTGTGAACTTTCAAGATTGCCTTTCCTGAGGACTTGGATTAGAACCAGATGCGCAATAGTGTTACATCTGAGTTGTGGAATAATTCAGATAAACTTCTTTCAAGATCACACTAAAATAATTGTGTGTCCAATCATGGGAGCAGTCACTTACATTGATGAAGAGAAGAATTTCAGGACCTTCAAGCTAAGTGCAATTGAGCAATATGGTTGCTCTAAAGGTCTTGCTAGCCGCCTGAAGTATGCAAAGACAATGGTAGAAAGACTTCAGAGTTCAAAAAGCGGGGGCCATGGACGGTGTTAGGTGAACGTTTTATCATATCTTTTGTTTTTTTGCGAATTCAAGAATTACCTGGATAGCGTGCTCGGCGTagcataagcgtcaaaactacaaaaaagattgcacgaatggttaatgcgtcttctgtttgatttaatggcttgaaaggaacgtcgggtactttgctataattctattttcggtatttttgatatcttgattattttcagaattacagcgtttttcttttccttgaaagaaaaccttaatttaagaaggtctgtagtatggtggtaagcagaaatctgtagcttttctggtctacgatttagcaatttgatgacgtcacaacctcaaaactggttgaaacatagaagatgctgacctgacgttcctttcaaggcaatcaaacggaagatgcattagccactcgtgcaattatttttctttttaaaatttgaacctatactCATCATCATCATTAGCAAAATGCAGTATACTGCTCGGCCTGTTTTGTATTGTAATGGTCTGTTTTATGGCATCACAACCAGGCGATTTATTGGGCTATCCGAAGAACAAAGAATGGTTCTGAACAAGATTTCTCTATTGTATTTGATAACCAGCACGTGCGAGGTTTTTCTCTCGAAATTAGTCCACGTTTCCAAGATAAGAGCCCGAAAACCTTGTTTGCCAGACATTTGAGATTTGTTTGCCAAGCTATGTACTCCCGTTTGGCCGCGTCGCAAAACTTTGTTTGACAAACAGAATTATGGAGAATTTGTTGGGTAAAGTTTCTCAAAAGTTCACAAAATTCTCTTCTTGTCATCAGCCAACGATGACTGTCAATCAATACTTTACGACGTTGCTATATACGGACAGATTTCTTGCTTGGCGATCAAAACTCAATTTTTCCTCATCTGGCCAGGACTTTGGATGCGAAAATTTGCTACCGCTCCAGAGTTAAAGACCCATTACACACCAACAAAACGGCGCACGTGTTTACAGCGCCTTTGCAGAATTTCTGTTTCAGAGATTGTAGCGGGCCTGCAGACTTCTTAACAGAACAGACTACTATGCAATGGATCTTTAAGCCAGGATCATATTGGGTTGCTGTTGTCGTTAGAATAGCAGGGAACGAACGACTCGAGAGACCCAAAAGGCTGAATGTGAGAAATTAAGGAGTTTATTTTCACCGTTCACATTCGGTATTTGGGGTTTTAGGGTAGTTGTGGTTGTTTGTTGCGACGACTCCAGCAACTGCAATGACCTAACGAGAACCAGGCTttaaaggacaactccggggtttgtaaaattaatgttagaaaacaaacttaccatctcctgaatcaaatgacaaacttttttccgcatttagacttctgtttcatgtgtcaattcaataaatatcttagtaatctaggccaaatgtccctctatcggtctccattttgtccacgataaggacgctagtcacgattcagagacgagaaaataatagggctgcctcgttcccagagggctttgagatgacttcagttcgcaattgtcactttttatgacgtcactgcgcagtggtcgctttttaatacgtaatttcgcagagaaaagaggaaaaatagttgaaaaaaggacgatacaccattcataacagcacaatgtttcattttatcatcaattataccaaccccggaattTGCAAACTTACTATTGAGCgtcttacacaagattccagtagtaggcatagaataggaatcattttctttgctcgtgtacatttctgaacaatgataagagctctgtttttctacccacccaagaattaaaacaaggcTATGATATGATGACTGAAAAGTTTCCTAAACTAATTGTTTTGTAGAGAGTTTTTAAAGCAGGCTTGCGCAGTACAGTAATAAACCCGCATATAAGAACCATAATTTACGAGCTCATCTAGTGGCGGAATTGAGGGAGGGGGCAAGCGCCTTCCCTTTTCGTGAAGAATACTATGCTTCGCGCCATCTTTTGGGTGAAATGCCTGGCCCTTATTGCGACACAAACCCACTCTTTTTTACGTCTTCGGGCTAGATATAACAACAACGTAAATTAAGGTATTTGACCGTTCGTGAAAGTACTTATTTTTGATCGAAAAGTGAGCCTAGAGGCTTGCCATTTTCGTTAAATTTTGTAGCTTATAAAAGTAGTTATTTTCATCTAAAAGTAGGCCTCTCTCACTAAATTCGGGAGATTTGAAAATGGCTATTTTTGAATAAAGGTTTTGCCTTTTTCGACAAGATCTAAAAAAAATCATGTTTTTGACTCAACTCCACTCCCAATGATATTTCACTGTTTATTTGTCTGCCGAAAGAGATGTCATGAGAATTCATAGCAATAATTTGGGACATGGTTAAGCAGGattcatgcagtcggcatgacgtcagatcagcgttgaaaacacgacaccatcttgttttggggtaaatcttcagaaaatttgtataggtttctggtggatatttgcacaaagttgcataacattgctcttatattctccttcgcgatagtgcgtaggaaaaagatatgtagcaattgtcagtcagacttaaatcaatgaaacaattgcacgaataagctgttcttgaaaacaaaacataaacttattccaagaaaactgtgagaaacttgcctttgcgatgataattttgtaaccagcgccacaaactccgtcagctgtatgttgctcgtcgcttcttcaaattcagtcttccttttagacattcgcttatctatccgctaaagttttggaatgatctcaacagctttcaaatttttagaattgatttatttcgataaacaaacgagacactctatgttttgtaatagcttcatttgcccgttttgtaatagcttcaaagactgattttcaagagcgaattgataaagtcacgtgacatgtcgtctgtatggatAGACTCACCTAAGTAGGTTCTTATATGCGTTTTTATGTATAAAGAAAATTGGAAGAACAGTTACTGTCCTGAATATCGTAGCCCTAGATTTGTACAGCACATAACCTGGTCATAACGTAGTTGAGAAAAGTTTTCCTGAATATCGTAGCCCTAGATTTGTACAGTACATAACCTGGTCATACGTCATAACGTAGTTGAAAAAAGTTTTCCCGTGATT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00659 all species →	POLO_box	POLO box duplicated region	Family	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000959 all species →	Domain	POLO box domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR036947 all species →	Homologous_superfamily	POLO box domain superfamily	Interproscan
IPR033701 all species →	Domain	First polo-box domain	Interproscan
IPR033695 all species →	Domain	Second polo-box domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24345 all species →	SERINE/THREONINE-PROTEIN KINASE PLK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0000776 all species →	Cellular Component	kinetochore	Interproscan
GO:0000922 all species →	Cellular Component	spindle pole	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06631	PLK1; polo-like kinase 1	EC:2.7.11.21	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.