Gene detail

Detailed information of scaffold2.g124.t1 in Morbakka virulenta

Genomic Location: scaffold2:4733141...4753370
NR annotation: XP_003384751.1, PREDICTED: AP-4 complex subunit sigma-1-like isoform X1 [Amphimedon queenslandica]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q3ZBB6	AP-4 complex subunit sigma-1 OS=Bos taurus OX=9913 GN=AP4S1 PE=2 SV=1
Q9Y587	AP-4 complex subunit sigma-1 OS=Homo sapiens OX=9606 GN=AP4S1 PE=1 SV=1
Q9WVL1	AP-4 complex subunit sigma-1 OS=Mus musculus OX=10090 GN=Ap4s1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01217	Clat_adaptor_s	Clathrin adaptor complex small chain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011012	Homologous_superfamily	Longin-like domain superfamily	Interproscan
IPR016635	Family	Adaptor protein complex, sigma subunit	Interproscan
IPR000804	Conserved_site	Clathrin adaptor complex, small chain	Interproscan
IPR022775	Domain	AP complex, mu/sigma subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11753	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015031	Biological Process	protein transport	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0030117	Cellular Component	membrane coat	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12403	AP4S1; AP-4 complex subunit sigma-1	-	Membrane trafficking	ko04131	deepkoala