Detailed information of scaffold2.g150.t4 in Aurelia aurita

Genomic Location: scaffold2:1701314...1716732
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Transcription factor familyARID · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02375
all species →
JmjNjmjN domainFamilyInterproscan
PF01388
all species →
ARIDARID/BRIGHT DNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036431
all species →
Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR003349
all species →
DomainJmjN domainInterproscan
IPR001606
all species →
DomainARID DNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10694
all species →
LYSINE-SPECIFIC DEMETHYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000785
all species →
Cellular ComponentchromatinInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006338
all species →
Biological Processchromatin remodelingInterproscan
GO:0010468
all species →
Biological Processregulation of gene expressionInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold2.g150.t4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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