Detailed information of scaffold2.g169.t2 in Aurelia aurita

Genomic Location: scaffold2:1943340...1994910
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13176
all species →
TPR_7Tetratricopeptide repeatRepeatInterproscan
PF13181
all species →
TPR_8Tetratricopeptide repeatRepeatInterproscan
PF12770
all species →
CHATCHAT domainDomainInterproscan
PF17874
all species →
TPR_MalTMalT-like TPR regionRepeatInterproscan
PF13424
all species →
TPR_12Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR024983
all species →
DomainCHAT domainInterproscan
IPR052699
all species →
FamilyRegulatory & Mitotic Spindle AssociatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10098
all species →
RAPSYN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24936TTC28; tetratricopeptide repeat protein 28-Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP