Detailed information of scaffold2.g287.t2 in Aurelia aurita

Genomic Location: scaffold2:3636793...3659031
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08625
all species →		Utp13Utp13 specific WD40 associated domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013934
all species →		DomainU3 small nucleolar RNA-associated protein 13, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19854
all species →		TRANSDUCIN BETA-LIKE 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000472
all species →		Biological Processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000480
all species →		Biological Processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0030686
all species →		Cellular Component90S preribosomeInterproscan
GO:0034511
all species →		Molecular FunctionU3 snoRNA bindingInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold2.g287.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP