Detailed information of scaffold20.g78.t1 in Morbakka virulenta

Genomic Location: scaffold20:3092336...3127543
NR annotation: XP_027036877.1, nostrin-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6WKZ7Nostrin OS=Mus musculus OX=10090 GN=Nostrin PE=1 SV=2
Q5I0D6Nostrin OS=Rattus norvegicus OX=10116 GN=Nostrin PE=1 SV=1
F1LRS8CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00611FCHFes/CIP4, and EFC/F-BAR homology domainFamilyInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR001060DomainFCH domainInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR031160DomainF-BAR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23065PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20126NOSTRIN; nostrin-Membrane traffickingko04131deepkoala

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