Gene detail

Detailed information of scaffold20.g86.t2 in Aurelia aurita

Genomic Location: scaffold20:807557...825346
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI1 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00780 all species →	CNH	CNH domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001180 all species →	Domain	Citron homology (CNH) domain	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR032914 all species →	Family	Vam6/VPS39/TRAP1 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12894 all species →	CNH DOMAIN CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006914 all species →	Biological Process	autophagy	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0034058 all species →	Biological Process	endosomal vesicle fusion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold20.g86.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.