Detailed information of scaffold200.g2.t2 in Morbakka virulenta

Genomic Location: scaffold200:15953...30955
NR annotation: XP_047139224.1, signal recognition particle 54 kDa protein [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZVN5Signal recognition particle subunit SRP54 OS=Danio rerio OX=7955 GN=srp54 PE=2 SV=1
Q2T9U1Signal recognition particle subunit SRP54 OS=Bos taurus OX=9913 GN=SRP54 PE=2 SV=1
P61010Signal recognition particle subunit SRP54 OS=Canis lupus familiaris OX=9615 GN=SRP54 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02881SRP54_NSRP54-type protein, helical bundle domainDomainInterproscan
PF00448SRP54SRP54-type protein, GTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022941FamilySignal recognition particle, SRP54 subunitInterproscan
IPR013822DomainSignal recognition particle SRP54, helical bundleInterproscan
IPR036225Homologous_superfamilySRP/SRP receptor, N-terminalInterproscan
IPR042101Homologous_superfamilySignal recognition particle SRP54, N-terminal domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000897DomainSignal recognition particle, SRP54 subunit, GTPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005786Cellular Componentsignal recognition particle, endoplasmic reticulum targetingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0006616Biological ProcessSRP-dependent cotranslational protein targeting to membrane, translocationInterproscan
GO:0008312Molecular Function7S RNA bindingInterproscan
GO:0030942Molecular Functionendoplasmic reticulum signal peptide bindingInterproscan
GO:0048500Cellular Componentsignal recognition particleInterproscan

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