Gene detail

Detailed information of scaffold202.g10.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold202:129353...140374
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold202.g10.t2

gccttcgttgtttgagatttgtttttatcagtcaacttgaagagaaaaagattatcaaagatttgtaattctatagaaattggactttaattggtgcaggttatttaccaaagttggaaacaggcagtggaagtaatttgtgaagattgttctcaactctcgttgctattatgattcctaatgagctcaagttggtgtttcttgccttcctggtggcccagtcacttggacatatataccgtctgccgtgcaagaaatttgcagagtttagcatcgttgaaaaggacagtggcctaaatacagatgctatttataacatccttgacaacacaaacaaaaatgcctgcagagatgtatgcatacgtcataatgagtgcaaatctttcagtaccaatggtgatgcttgtgaactatacactaaaacaacagaggattcgaatgatggcgtcagtttggaatatcgccctggctggacatattattcaacttattacggtgatacactggccggtccaacttgcagaagagtgaacccatgtcctggaatgcaatgcactgatatttgtgggtatccaggataccattgccaagatatcgtttaccacccgtatgtacacgttcatgttcaatatgtaaccacacaacctgcagcaacgacggtgcaacctgaagcaacgacaaaaccaggcactgtgacacaatctgtcgctcctacaacaaaaccaggcactgtgacaaaatctgtcgctcctacaacaaaaccaggcactgtgacaaaatctgtcgctcctacaacaaaaccagcactattgtcagaagaaaagataagaagaaatagaagagattgcgaagatccatgtaaatatagattctgtgctgcatatccccatgctgtttgctatcggagccaaaaagatcgctgcaaaccaatattttacatcagaggtggattcttgcaaccaaatcggagaatcactgactgtggtataaagtgtgtggaaaaatgtccttcaacaaagaaggatgtatgtgcaacgaacggtcaaacatataagaatttgtgtttgctgaatgtccagaaatgtcgcagtaaaggaaaattaggtctccatgaaactaaaaaatgttgtaagtctagagtgaagatagtgtctcaaggacagttgtctgctaaaaaaacaaaaggcactggaggaaaatcaacgatgagagctggtccaggggatggtcataaattcactgtatctatgccaaccttgaaaagaggctacaatattctggccgtcagtgaacaatcaagtccccactggtctgccagcaccaaaagcttcgacacttttgaagatgacagcgcaaaacttgaaatgaagaacttcatagatggaattagtgaaaatagcattgttctggttgcaattcaagaggaaggcacaaggaaagcatccccagatgtgtacgaagcactgaaggaaatacatggcactgaacctttccagaaagaattcagaggagcgtttgcaatgattggctacaaaggagtgacaggagcaaggacaccttattgggtccagcaagtcgtgcaaaaagatcttagaaaagacgctgttattgaggctgacgtattgctgtattgtagtatgtttgaaattagttgaggttgaggattctcgagagtgccgttggtagagtaattattcttgctgttaaaactcgcataaataaaccgcggattaagaagcttcagcccctctgggggtggggagggggctcgtaaaattttccatacggggacgtgctgctcgacagggtataatttttgtatagctagctccattttaggccatgttcacttcacaagtttgattgtttgtttagcaacatttccgcatttcaaacagatttctaacaacattcaagggctgcgcacaaattctgtttcaagaaactcaaggacagggtatcgtttttgagtacttcactccgggacagggtttactttcaggaatttgactccacgacagggtactttttcagattttccagcggcacctccccgtattattattattatcaatttctttaccgttggatacataaaaatatagctaaaagtaatcagctaattaattccaaagtaatca

Transcript

scaffold202.g10.t2

GCCTTCGTTGTTTGAGATTTGTTTTTATCAGTCAACTTGAAGAGAAAAAGATTATCAAAGATTTGTAATTCTATAGAAATTGGACTTTAATTGGTGCAGGTTATTTACCAAAGTTGGAAACAGGCAGTGGAAGTAATTTGTGAAGATTGTTCTCAACTCTCGTTGCTATTATGATTCCTAATGAGCTCAAGTTGGTGTTTCTTGCCTTCCTGGTGGCCCAGTCACTTGGACATATATACCGTCTGCCGTGCAAGAAATTTGCAGAGTTTAGCATCGTTGAAAAGGACAGTGGCCTAAATACAGATGCTATTTATAACATCCTTGACAACACAAACAAAAATGCCTGCAGAGATGTATGCATACGTCATAATGAGTGCAAATCTTTCAGTACCAATGGTGATGCTTGTGAACTATACACTAAAACAACAGAGGATTCGAATGATGGCGTCAGTTTGGAATATCGCCCTGGCTGGACATATTATTCAACTTATTACGGTGATACACTGGCCGGTCCAACTTGCAGAAGAGTGAACCCATGTCCTGGAATGCAATGCACTGATATTTGTGGGTATCCAGGATACCATTGCCAAGATATCGTTTACCACCCGTATGTACACGTTCATGTTCAATATGTAACCACACAACCTGCAGCAACGACGGTGCAACCTGAAGCAACGACAAAACCAGGCACTGTGACACAATCTGTCGCTCCTACAACAAAACCAGGCACTGTGACAAAATCTGTCGCTCCTACAACAAAACCAGGCACTGTGACAAAATCTGTCGCTCCTACAACAAAACCAGCACTattgtcagaagaaaagataagaagaaatagaaGAGATTGCGAAGATCCATGTAAATATAGATTCTGTGCTGCATATCCCCATGCTGTTTGCTATCGGAGCCAAAAAGATCGCTGCAAACCAATATTTTACATCAGAGGTGGATTCTTGCAACCAAATCGGAGAATCACTGACTGTGGTATAAAGTGTGTGGAAAAATGTCCTTCAACAAAGAAGGATGTATGTGCAACGAACGGTCAAACATATAAGAATTTGTGTTTGCTGAATGTCCAGAAATGTCGCAGTAAAGGAAAATTAGGTCTCCATGAAACTAAAAAATGTTGTAAGTCTAGAGTGAAGATAGTGTCTCAAGGACAGTTGTCTGCTAAAAAAACAAAAGGCACTGGAGGAAAATCAACGATGAGAGCTGGTCCAGGGGATGGTCATAAATTCACTGTATCTATGCCAACCTTGAAAAGAGGCTACAATATTCTGGCCGTCAGTGAACAATCAAGTCCCCACTGGTCTGCCAGCACCAAAAGCTTCGACACTTTTGAAGATGACAGCGCAAAACTTGAAATGAAGAACTTCATAGATGGAATTAGTGAAAATAGCATTGTTCTGGTTGCAATTCAAGAGGAAGGCACAAGGAAAGCATCCCCAGATGTGTACGAAGCACTGAAGGAAATACATGGCACTGAACCTTTCCAGAAAGAATTCAGAGGAGCGTTTGCAATGATTGGCTACAAAGGAGTGACAGGAGCAAGGACACCTTATTGGGTCCAGCAAGTCGTGCAAAAAGATCTTAGAAAAGACGCTGTTATTGAGGCTGACGTATTGCTGTATTGTAGTATGTTTGAAATTAGTTGAGGTTGAGGATTCTCGAGAGTGCCGTTGGTAGAGTAATTATTCTTGCTGTTAAAACTCGCATAAATAAACCGCGGATTAAGAAGCTTCAGCCCCTCTGGGGGTGGGGAGGGGGCTCGTAAAATTTTCCATACGGGGACGTGCTGCTCGACAGGGTATAATTTTTGTATAGCTAGCTCCATTTTAGGCCATGTTCACTTCACAAGTTTGATTGTTTGTTTAGCAACATTTCCGCATTTCAAACAGATTTCTAACAACATTCAAGGGCTGCGCACAAATTCTGTTTCAAGAAACTCAAGGACAGGGTATCGTTTTTGAGTACTTCACTCCGGGACAGGGTTTACTTTCAGGAATTTGACTCCACGACAGGGTACTTTTTCAGATTTTCCAGCGGCACCTCCCCGTATTATTATTATTATCAATTTCTTTACCGTTGGATACATAAAAATATAGCTAAAAGTAATCAGCTAATTAATTCCAAAGTAATCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15711 all species →	ILEI	Interleukin-like EMT inducer	Domain	Interproscan
PF07648 all species →	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039477 all species →	Domain	ILEI/PANDER domain	Interproscan
IPR003609 all species →	Domain	PAN/Apple domain	Interproscan
IPR002350 all species →	Domain	Kazal domain	Interproscan
IPR036058 all species →	Homologous_superfamily	Kazal domain superfamily	Interproscan

PANTHER

No PANTHER signature was detected for scaffold202.g10.t2. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold202.g10.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.