Genomic Location: scaffold204:859767...861267
NR annotation: ROL46693.1, Pogo transposable element with KRAB domain [Anabarilius grahami]
| CDS |
| scaffold204.g24.t1 |
| Transcript |
| scaffold204.g24.t1 |
| Protein |
| scaffold204.g24.t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03221 | HTH_Tnp_Tc5 | Tc5 transposase DNA-binding domain | Domain | Interproscan |
| PF03184 | DDE_1 | DDE superfamily endonuclease | Family | Interproscan |
| PF09607 | BrkDBD | Brinker DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006600 | Domain | HTH CenpB-type DNA-binding domain | Interproscan |
| IPR050863 | Family | Centromere and Transposable Element-Derived Protein | Interproscan |
| IPR004875 | Domain | DDE superfamily endonuclease domain | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR018586 | Domain | Brinker DNA-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19303 | TRANSPOSON | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K09422 | MYBP; transcription factor MYB, plant | - | Transcription factors | ko03000 | deepkoala |
