Detailed information of scaffold205.g3.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold205:19980...107664
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02187
all species →
GAS2Growth-Arrest-Specific Protein 2 DomainFamilyInterproscan
PF00435
all species →
SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018159
all species →
RepeatSpectrin/alpha-actininInterproscan
IPR003108
all species →
DomainGAR domainInterproscan
IPR036534
all species →
Homologous_superfamilyGAR domain superfamilyInterproscan
IPR018247
all species →
Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992
all species →
Homologous_superfamilyEF-hand domain pairInterproscan
IPR002048
all species →
DomainEF-hand domainInterproscan
IPR002017
all species →
RepeatSpectrin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915
all species →
SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008017
all species →
Molecular Functionmicrotubule bindingInterproscan
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0003786
all species →
Molecular Functionactin lateral bindingInterproscan
GO:0005826
all species →
Cellular Componentactomyosin contractile ringInterproscan
GO:0030036
all species →
Biological Processactin cytoskeleton organizationInterproscan
GO:0030054
all species →
Cellular Componentcell junctionInterproscan
GO:0030864
all species →
Cellular Componentcortical actin cytoskeletonInterproscan
GO:0032432
all species →
Cellular Componentactin filament bundleInterproscan
GO:0042995
all species →
Cellular Componentcell projectionInterproscan
GO:0051015
all species →
Molecular Functionactin filament bindingInterproscan
GO:0051017
all species →
Biological Processactin filament bundle assemblyInterproscan
GO:1903478
all species →
Biological Processobsolete actin filament bundle convergence involved in mitotic contractile ring assemblyInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10382DST; dystonin-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP