Detailed information of scaffold209.g2.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold209:14136...41434
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023
all species →
AnkAnkyrin repeatRepeatInterproscan
PF13920
all species →
zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF18346
all species →
SH3_15Mind bomb SH3 repeat domainDomainInterproscan
PF12796
all species →
Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770
all species →
Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR002110
all species →
RepeatAnkyrin repeatInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR040847
all species →
DomainMind bomb, SH3 repeat domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24202
all species →
E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0016567
all species →
Biological Processprotein ubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold209.g2.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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